Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03786 ATGGGATTGCAGCTCATTTTCCTGCTAATTAAGCTACATTTTGTTACATGTACACCCCATCTTCATGAATATGCTGCAAGCTATTTGCACCATTCGAGAATCCGAAGCCCTTCAAGCATTGCATTTCCACCCACAGAGTCACCTACTACAGTTCCTGCTGGTACTACACTTCCACCTTCCCAACCATTCCCCAAAAGAAAATGGATGCACAGTTCTATGGACTCTCCAATTCCACGCCACAAGCATCACCATTCCAGAAGAAAGTTCAGCAACCAAGCTCCTGGACCAACCTTTTCAATCAATCCCCATACTCATCAAGGTCCTCCTCCTGTCATCAAATCACAACATTCATTCTCTTCACCTGTAAATGCACCAGCACCAGCACCAATAGTTCTATCACACCACTTGAATGTACCGTATACTTCACCTAGAATTTCACCTCTAGGTTCATCAATGAAGAAGACAAGGACTCCACCAGCAGCATATGCTTTTGTTCTACCATCTCCACCGCCTAACAAAGATTGTATGTCACTGACATGCTCTGAGCCCTTGACATATACACTTCCTGGATCACCTTGTGGTTGTGTTTGGCCACTCCAAGTTAAACTTCGCATCAGCGTTGCAATATACAAGTTTTTTCCTTCGGTTTCAAAGCTGGCCAAAGAAATTGCAGCTAGTGTTTTGCTGAACCGTAATCAAGTACGCATTGTGGGTGCCGATGCAACTACTCAGCAGCTCGAGAAAACTACTGTTCTCATAAACTTGGTGCCCCAAGGAGTGAAATTTGATGATACAACAGCTCTTTTAATATATAAGAAATTCTGGCAGAGAGAGATTCTCAATGATGATTCTACCTTCGGTTCCTATGAAGTGCTCTATGTTCATTATCCAGGTCTTCCACCGTCTCCACCTTCAAATGTTTACGGTATAGATGTTGAACCATACCCTGGTCACGACAACAATGGAACAATAATAAAACCTTTAGGAGTAGATGTCTCAAGGAAGCAAAAAGAAGGGAGTGGTGGAAGAATGCTTATTATGATCATCCTTTCATCTTTTACCGCCTTCCTTCTATTCATTGGACTTGCATGGATTTTTCTCTTGAAGTGTGGTTCCAGCACTCTTGAACCTGGACATATACCAGATGCCAAAATTTCATCCTCTTCAATGCGATCAGCAGGTACTGCCAGTGTTAGGTCATTGACTTATGCGAGCATGCCAGGTTCTAGATCAATGTCCTTCGGTTCTGGAACAATAATCTATGCAGGATCAGCTAAAATATTTTCTTTGAACGAAATCGAGAAAGCAACAAATAACTTCAATTCTTCAAGCATACTAGGAGAAGGTGGCTTCGGTCTTGTTTACAAGGGTGACTTAAATGATGGCAGAGAGGTGGCTGTGAAGATTCTCAAAAGGGATGACCAGCATGGTGACCATGAATTCTTTGCAGAGTCAGAGATGCTTAGCTGCTTGCACCATAGGAATTTAGTTAAACTGATTGGTATATGCACAGAGAAACACACTCGCTGCTTAGTGTATGAGCTTGTTCCTAATGGCAGCGTGGAATCCCACTTACATGGTATGGACAAAGAAACCGAACCACTAGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTAGAGGATTAACCTATCTGCATGAAGATTGTAATCCATGTGTCATACACAGAGACTTCAAATCCAGCAACATCTTATTGGAATACGATTTTGTACCCAAAGTTTCAGATTTTGGCTTGGCTAGAACAACATTGAACGAGGGAAACAAGCCCGTTTCAACTCATGTTATTGGTACATTTGGCTACGTAGCTCCTGAATATGCAATGACAGGACATCTTCTTGTCAAAAGTGATGTTTACAGCTATGGAGTTGTGCTCCTTGAGCTGCTAAGTGGAAGAAAGCCTGTGGATTTGTCGCAGCCACCAGGACAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGTAAGGAGGGTTTGCAGAAGATCATAGACCCCATTATGAAGGATAGTGTTTCCATTGATACCATTGTAAAGGTTGCAGCAATTGCATCAATGTGCGTGCAATCAGAAGTCACTCAGCGTCCTTTTATGGGTGAAGTTGTTCAGGCCTTGACATTGGTATGCAGTGAGTTTGAAGAAAAAAGATGA 2175 0.4267 MGLQLIFLLIKLHFVTCTPHLHEYAASYLHHSRIRSPSSIAFPPTESPTTVPAGTTLPPSQPFPKRKWMHSSMDSPIPRHKHHHSRRKFSNQAPGPTFSINPHTHQGPPPVIKSQHSFSSPVNAPAPAPIVLSHHLNVPYTSPRISPLGSSMKKTRTPPAAYAFVLPSPPPNKDCMSLTCSEPLTYTLPGSPCGCVWPLQVKLRISVAIYKFFPSVSKLAKEIAASVLLNRNQVRIVGADATTQQLEKTTVLINLVPQGVKFDDTTALLIYKKFWQREILNDDSTFGSYEVLYVHYPGLPPSPPSNVYGIDVEPYPGHDNNGTIIKPLGVDVSRKQKEGSGGRMLIMIILSSFTAFLLFIGLAWIFLLKCGSSTLEPGHIPDAKISSSSMRSAGTASVRSLTYASMPGSRSMSFGSGTIIYAGSAKIFSLNEIEKATNNFNSSSILGEGGFGLVYKGDLNDGREVAVKILKRDDQHGDHEFFAESEMLSCLHHRNLVKLIGICTEKHTRCLVYELVPNGSVESHLHGMDKETEPLDWNARMKIALGAARGLTYLHEDCNPCVIHRDFKSSNILLEYDFVPKVSDFGLARTTLNEGNKPVSTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDLSQPPGQENLVAWARPLLTSKEGLQKIIDPIMKDSVSIDTIVKVAAIASMCVQSEVTQRPFMGEVVQALTLVCSEFEEKR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03786 724 ProSiteProfiles Protein kinase domain profile. 440 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03786 724 FunFam receptor-like serine/threonine-protein kinase ALE2 413 515 - -
Viun5g03786 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Viun5g03786 724 Gene3D Transferase(Phosphotransferase) domain 1 516 723 - -
Viun5g03786 724 MobiDBLite consensus disorder prediction 39 56 - -
Viun5g03786 724 MobiDBLite consensus disorder prediction 39 119 - -
Viun5g03786 724 Gene3D Phosphorylase Kinase; domain 1 415 515 - -
Viun5g03786 724 PANTHER OS01G0750732 PROTEIN 167 720 - -
Viun5g03786 724 ProSitePatterns Protein kinases ATP-binding region signature. 446 468 IPR017441 GO:0005524
Viun5g03786 724 SUPERFAMILY Protein kinase-like (PK-like) 420 714 IPR011009 -
Viun5g03786 724 Pfam Protein tyrosine and serine/threonine kinase 443 713 IPR001245 GO:0004672|GO:0006468
Viun5g03786 724 CDD STKc_IRAK 446 714 - -
Viun5g03786 724 MobiDBLite consensus disorder prediction 90 119 - -
Viun5g03786 724 FunFam Receptor-like serine/threonine-protein kinase ALE2 516 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03786 Viun-Chr5 46551114 46555080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03786 81 724 Receptor kinase-like Gene Family AT5G56890 55.522 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Viun5g03786 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03786 - - gmx:100798578 1209.51