Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03783 ATGGCACTCAAAGAACCACCCAAAAGGCTCCAATACCCACTCGACTCTTCCTCCTACAAGCTCCTCAACGAGATCGGCGCCGGCGTCAGCGCCGTCGTCTACAAAGCCATCTGCATCCCCATGAACTCCGCCGCCGTCGCAATCAAATCCATAGACCTCGACCGTTCCCGCCCCGACTTGGACGACGTTCGCCGCGAGGCCAAAACCCTGTCCCTCCTTTCCCACCCTAACATCCTCAAAGCACACTGCTCCTTCACCGTCGACCGCCGCCTCTGGGTGGTCATGCCCTTCATGGCCGCAGGATCTCTCCAATCCATCATCTCTCACTCCCACCCCAACGGCTTAACCGAGCCCTGCATCGCGGTGGTCCTCCGAGACACCCTCAACGCCCTCTCCTACCTCCACGGCCAGGGCCACCTCCACCGTGACATAAAAGCCGGCAACATCCTCGTCGACACCAACGGACAGGTAAAGCTCGCGGATTTCGGCGTGTCGGCTTCCATCTACGAGTCCTCCACGTGTTCCTCCTCTCTCAAGTTCACCGATGTTGCAGGCACGCCGTATTGGATGGCTCCGGAGGTGATTCACTCGCACACAGGGTACAGTTTCAAGGCTGATATATGGTCCTTCGGGATAACCGCTTTGGAGCTGGCGCATGGAAGACCTCCTCTCTCTCACCTTCCACCTTCGAAGTCCATGATGCTCAAAATCACGAAGCGGTTTCGGTTCTCCGATTTGGACAAGTATAGAAAGGGGAACGGGAACAAGTTCTCGAAGGCGTTCAAGGACATGGTGGCTTCTTGTCTGGACCAAGATCCTTCGAAAAGACCCACTGCTGATAAGTTGCTGAAACACCCTTTTTTTAAAAACTGCAAAGGAACTGATTTTCTGGTGAAGAACGTGCTTTTAGGGTTGCCCAGTGTGGAGAAGAGGTACAAGGAGAGCAAGGTGAATGAACATGATGATGATGGTGGTGATGATGAAGATGAAGACCCCTCCATGCAGGTGAAGGAGAGAAGGATAAGTGGGTGGAACTTCAACCAAGACGGGTTGGAGCTTGATCCTGTGTTTCCAAACGATGATGCAGGGGCTAAAGAGGGTGAGGTTGGAAGTGTTATGAGAAAAATGGAGGAGCATGTTAATGTTGTTGGAAGTGAAGGTGGTGTGAAGAAGAAGGAGAAGATGTTGGCGACTCTGAATGTGCTGAAAGGGAGCTTGGAGCAAGAGCTGTTGGAAGTGAAGTTTCTGGTGAATATGATAAGAGGAGAAGAGGAGAGTGATCATCATCATGATCAAACGGCTGCTGCTGCTCATCATGATCATGATCAAGATCATGGTGAGGAGAAGGAGATTTCTAGGCTGAGGGTTGCATTGGAGAATGAGAGGAAGAAGAACTTGCAGTTGGAGTTGCAGCTCCACACCTGCAAGCTTCAACTTTCTTCTCCTCTCAATATTTCCAACTAA 1464 0.5184 MALKEPPKRLQYPLDSSSYKLLNEIGAGVSAVVYKAICIPMNSAAVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAAGSLQSIISHSHPNGLTEPCIAVVLRDTLNALSYLHGQGHLHRDIKAGNILVDTNGQVKLADFGVSASIYESSTCSSSLKFTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDLDKYRKGNGNKFSKAFKDMVASCLDQDPSKRPTADKLLKHPFFKNCKGTDFLVKNVLLGLPSVEKRYKESKVNEHDDDGGDDEDEDPSMQVKERRISGWNFNQDGLELDPVFPNDDAGAKEGEVGSVMRKMEEHVNVVGSEGGVKKKEKMLATLNVLKGSLEQELLEVKFLVNMIRGEEESDHHHDQTAAAAHHDHDQDHGEEKEISRLRVALENERKKNLQLELQLHTCKLQLSSPLNISN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03783 487 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Viun5g03783 487 MobiDBLite consensus disorder prediction 314 336 - -
Viun5g03783 487 Pfam Protein kinase domain 19 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03783 487 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 450 IPR047173 GO:0043539
Viun5g03783 487 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
Viun5g03783 487 SMART serkin_6 19 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03783 487 FunFam Serine/threonine-protein kinase BLUS1 8 97 - -
Viun5g03783 487 Gene3D Transferase(Phosphotransferase) domain 1 101 337 - -
Viun5g03783 487 Coils Coil 451 478 - -
Viun5g03783 487 FunFam Serine/threonine-protein kinase BLUS1 101 331 - -
Viun5g03783 487 ProSiteProfiles Protein kinase domain profile. 19 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03783 487 MobiDBLite consensus disorder prediction 424 449 - -
Viun5g03783 487 SUPERFAMILY Protein kinase-like (PK-like) 17 301 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03783 Viun-Chr5 46499410 46500941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03783 9 467 MAP Kinase Kinase Kinase Kinase AT4G14480 55.306 2.82e-179 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Viun5g03783 Pkinase 6.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03783 K08835 - gmx:100820227 743.036