Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun5g03782 | ATGGAAGGTGGCACGAGTTCCTCAAGGAGCACCACACAGGCTTGTGCTGCTTGTAAGTACCAACGCAGGAAATGCGGACCCACCTGCATTCTCGCACCTTTCTTTCCTCATTATCGCCAAAAACAGTTCCTTCACGCTCACAGGCTTTTCGGAGTTGGCAAAATCATCAACATGATCAAGCCTCTTGACCCTGTTAACAGAAACTCAGCCATCAACACCATTATCTATGAGTCTGATATGAGAGCCAGAAACCCTGTTGGAGGCTGCTTAAGCTTCATTCTTCACTTGCAATCCCTCATCGTCTCTGCTGAATCCGAACTCCAATTTCTCCTTCAACACCTTGCCTTCTTCAGAGCACAACTTCTTCATTCCACTGCCACACCACAACCACCACCACCACCACCTTCCTCCTCCTCCTACGACCCTTATCTTCCACAAATGTCACTTCAAGAATCAAAAGATCCGTCACAGCTTCACCCACAACAACTTGGAAATGATCCCTTGCAGCTTCAACAGCAAGAACAACCCAAAGATCCGTGCTTTAATCACAACTCGTCTTTTAATTACTATGCATTGCAAGAAGATATGAGCGTGTCCGACATCGACAACTTAGTACATTTCTTTCCGTGGTTGCCGCCGCAGGATGACACCACCAGCCAATATCGAGATCCCTGA | 675 | 0.4726 | MEGGTSSSRSTTQACAACKYQRRKCGPTCILAPFFPHYRQKQFLHAHRLFGVGKIINMIKPLDPVNRNSAINTIIYESDMRARNPVGGCLSFILHLQSLIVSAESELQFLLQHLAFFRAQLLHSTATPQPPPPPPSSSSYDPYLPQMSLQESKDPSQLHPQQLGNDPLQLQQQEQPKDPCFNHNSSFNYYALQEDMSVSDIDNLVHFFPWLPPQDDTTSQYRDP | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun5g03782 | 224 | MobiDBLite | consensus disorder prediction | 126 | 140 | - | - | |
Viun5g03782 | 224 | ProSiteProfiles | LOB domain profile. | 13 | 114 | IPR004883 | - | |
Viun5g03782 | 224 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 12 | 156 | - | - | |
Viun5g03782 | 224 | MobiDBLite | consensus disorder prediction | 125 | 164 | - | - | |
Viun5g03782 | 224 | MobiDBLite | consensus disorder prediction | 141 | 164 | - | - | |
Viun5g03782 | 224 | Pfam | Lateral organ boundaries (LOB) domain | 14 | 109 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun5g03782 | Viun-Chr5 | 46497663 | 46498337 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun5g03782 | 13 | 118 | AS2 family | AT3G13850 | 55.660 | 2.50e-38 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Viun5g03782 | LOB | 9e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun5g03782 | - | - | vun:114184788 | 443.736 |