Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03767 ATGGGTGCTTCGGGAAAGTGGTTCAAGTCACTCATTCCTTTTCGAAAGACCTCAACTTCAACAACTGATCAAGAGAAGGGTGGTGAAAACAAGAGCAAGAAGAAATGGAAGCTATGGAGAGCTTCTTCAGAAGGGTCCACCGTCAAGAAAGGTGGTGAAACTGCTGTACCTGATTCTTCCTTTACTTATGCAGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAAACGAGCTTTGAGGGCCCTGAAGGCAGTGGTAAGGCTGCAAGCTATTTTTCGAGGCAGGTTAGTCAGAAAGCAAGCAGCCGTCACTCTGAGGTGTATGCAGGCTCTTGTTAGAGTTCAGGCACATGTGAGGGCAAGGAATGTGAGGAATTCTCCTGAAGGGAAAGCCGTGCAGAAATTACTTGATGAGTATCGCAACCTAGCTGATCCTTTTAAGCAAATTGAGCATGGATGGTGTGACATTCCTGGAACCATGGATGAAGTTAAAGCAAAGCTAAGAATGAGACAAGAAGGAGCTATCAAGAGGGATAGAGCGATGGCATACTCTCTGTCCACACAGCAGTCAAGACTGGTTGCCAGTCCAAATGCCAATAAGTTATTGACTCCTCTGAAGCAGCACAACCTAAGCAACAAGAGCTTAGGATGTAGCTTGTTAGAACGCTGGATGGAGGCCAAGCCTTGGGAGAGTCCAAATTACAGGAAGAGTGAAGACATTGTTCCTGCTTTTCAAATAAGAAAGAATGGTGTGACATCCAGGATTTCAGCAGTTAAACCTCTAATAACTAGCCAATCCACTCCTTCATCTTCGGCAATAAGCTCTGAATACATGTGTGATGATAGTCCTGTGTCAACTTCTTATACAGCTGGATCTCCATCTTTTCCGTCCACCAATACTGTTCTAATGGAAGCAGCAGAGGAAAGAGAGGTTCATCAACCAAGCTACATGAATTTGACTGAATCAACCAAGGCTAAACTGAAAACTAGCAGGAGTTCTTCCCAGAATTCAAAGAGTCTAGCGATGGAGGAGTGTGTGTCTCACAGCACAACCACAGGTTTGATGAATGGAGATTTTAGAAGCAGTTCTAATTCTGACCCTTCAGTTAACGTATGGAAGGATTCTTGTGCAACACCTCTGAGAGCAAGTTATCAAAAACGACAAATTCGGATATGA 1233 0.4477 MGASGKWFKSLIPFRKTSTSTTDQEKGGENKSKKKWKLWRASSEGSTVKKGGETAVPDSSFTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLAKRALRALKAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQAHVRARNVRNSPEGKAVQKLLDEYRNLADPFKQIEHGWCDIPGTMDEVKAKLRMRQEGAIKRDRAMAYSLSTQQSRLVASPNANKLLTPLKQHNLSNKSLGCSLLERWMEAKPWESPNYRKSEDIVPAFQIRKNGVTSRISAVKPLITSQSTPSSSAISSEYMCDDSPVSTSYTAGSPSFPSTNTVLMEAAEEREVHQPSYMNLTESTKAKLKTSRSSSQNSKSLAMEECVSHSTTTGLMNGDFRSSSNSDPSVNVWKDSCATPLRASYQKRQIRI 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03767 410 Pfam IQ calmodulin-binding motif 80 99 IPR000048 GO:0005515
Viun5g03767 410 Pfam IQ calmodulin-binding motif 102 119 IPR000048 GO:0005515
Viun5g03767 410 PANTHER IQ-DOMAIN 5-RELATED 1 373 - -
Viun5g03767 410 MobiDBLite consensus disorder prediction 17 38 - -
Viun5g03767 410 Gene3D - 76 127 - -
Viun5g03767 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 120 IPR027417 -
Viun5g03767 410 ProSiteProfiles IQ motif profile. 102 129 IPR000048 GO:0005515
Viun5g03767 410 SMART iq_5 77 99 IPR000048 GO:0005515
Viun5g03767 410 SMART iq_5 100 121 IPR000048 GO:0005515
Viun5g03767 410 ProSiteProfiles IQ motif profile. 78 106 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03767 Viun-Chr5 46419875 46422318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03767 1 393 IQD Protein Family AT1G72670 47.209 6.12e-91 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03767 - - gmx:100788715 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03767 5 46419875 46422318 Viun10g02505 10 39057162 39060386 PCT