Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03766 ATGGGTGCTTCGGGAAAGTGGTTCAAGTCACTCATTCCTTTTCGAAAGACCTCAACTTCAACAACTGATCAAGAGAAGGGTGGTGAAAACAAGAGCAAGAAGAAATGGAAGCTATGGAGAGCTTCTTCAGAAGGGTCCACCGTCAAGAAAGGTGGTGAAACTGCTGTACCTGATTCTTCCTTTACTTATGCAGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAAACGAGCTTTGAGGGCCCTGAAGGCAGTGGTAAGGCTGCAAGCTATTTTTCGAGGCAGGTTAGTCAGAAAGCAAGCAGCCGTCACTCTGAGGTGTATGCAGGCTCTTGTTAGAGTTCAGGCACATGTGAGGGCAAGGAATGTGAGGAATTCTCCTGAAGGGAAAGCCGTGCAGAAATTACTTGATGAGTATCGCAACCTAGCTGATCCTTTTAAGCAAATTGAGCATGGATGGTGTGACATTCCTGGAACCATGGATGAAGTTAAAGCAAAGCTAAGAATGAGACAAGAAGGAGCTATCAAGAGGGATAGAGCGATGGCATACTCTCTGTCCACACAGTCAAGACTGGTTGCCAGTCCAAATGCCAATAAGTTATTGACTCCTCTGAAGCAGCACAACCTAAGCAACAAGAGCTTAGGATGTAGCTTGTTAGAACGCTGGATGGAGGCCAAGCCTTGGGAGAGTCCAAATTACAGGAAGAGTGAAGACATTGTTCCTGCTTTTCAAATAAGAAAGAATGGTGTGACATCCAGGATTTCAGCAGTTAAACCTCTAATAACTAGCCAATCCACTCCTTCATCTTCGGCAATAAGCTCTGAATACATGTGTGATGATAGTCCTGTGTCAACTTCTTATACAGCTGGATCTCCATCTTTTCCGTCCACCAATACTGTTCTAATGGAAGCAGCAGAGGAAAGAGAGGTTCATCAACCAAGCTACATGAATTTGACTGAATCAACCAAGGCTAAACTGAAAACTAGCAGGAGTTCTTCCCAGAATTCAAAGAGTCTAGCGATGGAGGAGTGTGTGTCTCACAGCACAACCACAGGTTTGATGAATGGAGATTTTAGAAGCAGTTCTAATTCTGACCCTTCAGTTAACGTATGGAAGGATTCTTGTGCAACACCTCTGAGAGCAAGTTATCAAAAACGACAAATTCGGATATGA 1230 0.4472 MGASGKWFKSLIPFRKTSTSTTDQEKGGENKSKKKWKLWRASSEGSTVKKGGETAVPDSSFTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLAKRALRALKAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQAHVRARNVRNSPEGKAVQKLLDEYRNLADPFKQIEHGWCDIPGTMDEVKAKLRMRQEGAIKRDRAMAYSLSTQSRLVASPNANKLLTPLKQHNLSNKSLGCSLLERWMEAKPWESPNYRKSEDIVPAFQIRKNGVTSRISAVKPLITSQSTPSSSAISSEYMCDDSPVSTSYTAGSPSFPSTNTVLMEAAEEREVHQPSYMNLTESTKAKLKTSRSSSQNSKSLAMEECVSHSTTTGLMNGDFRSSSNSDPSVNVWKDSCATPLRASYQKRQIRI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03766 409 Pfam IQ calmodulin-binding motif 80 99 IPR000048 GO:0005515
Viun5g03766 409 Pfam IQ calmodulin-binding motif 102 119 IPR000048 GO:0005515
Viun5g03766 409 MobiDBLite consensus disorder prediction 17 38 - -
Viun5g03766 409 Gene3D - 76 127 - -
Viun5g03766 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 120 IPR027417 -
Viun5g03766 409 ProSiteProfiles IQ motif profile. 102 129 IPR000048 GO:0005515
Viun5g03766 409 SMART iq_5 77 99 IPR000048 GO:0005515
Viun5g03766 409 SMART iq_5 100 121 IPR000048 GO:0005515
Viun5g03766 409 PANTHER IQ-DOMAIN 5-RELATED 1 372 - -
Viun5g03766 409 ProSiteProfiles IQ motif profile. 78 106 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03766 Viun-Chr5 46419875 46422318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03766 1 392 IQD Protein Family AT1G72670 47.086 6.56e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03766 - - gmx:100788715 615.92