Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03764 ATGAAAAACTCATCAACTACATCACAACCTATGGCCACGGTTGCTGGAGTTCAGTTCCAAAACTTGCAGAGGTGTGGAAAGAGCTGCAGATTGAGATGGATAAACTATCTGAGACCTGATTTGAAACGGGGAAGCTTTTCTCCTCAAGAAGCAGCACTCATTATAGAACTTCATAGTATCCTTGGCAACAGGTGGGCTCAGATAGCGAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAGCTGCTTTCTCATGATGTTGTTCCTTCTTTAGCCACATTTTCTGATATTCACGGTCTTGCCAATGCTTCCATGGAAAGTTTCTTCCCTTTATCTGACAACACTATCCTAAACTCCCATCATCACTTAGACCACCTATACCTTCCCATCATCCCAACCCCAACAATCCTACAAGCCTTTGATCATCTCAACAATGATATCAAGATTGACATAAACAATTATCATAACAACAATAATAATAATCATCATCATAATTCCAATTTCCTACATTTTCAGAATCCAATGCCAGAAACAGTGCCACCATCATCCAACAACAACATTATTCCATCTTTGTTTGAATTAGATACATGGTCCTCCTTCGGGTGCGTACCCTTTCATCTTAATCCAAATCAACAAAGTCAAACAATGATCACCAAAACTGCTGATACCACCACCCCACACTTAATTCTTGAGAAACTCATCAATCCAAGTACATGGCAGCACCAAGCTGTGGAACCGACCGTTGATAATCTTGTTCCAAAAGTGTGTGAGAGCGTCGAGGATTATGTCTGCAGCATTCCGTTTTCTTCTTCTGCTGCCAATTCACAACATCATCAACACGAGGATGCTGTCGCCTGCTACACACCAGGTATTTGTCCACAAGATCAAATTGCAGTACCCAATCAAGTGGAGTACATTGATGCCATCATCATGTCATCGTTGCCATCCTCAACAACATCATCTTCATCAGTATCACTCTATCAAGCAGACAAATAG 1026 0.4113 MKNSSTTSQPMATVAGVQFQNLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDVVPSLATFSDIHGLANASMESFFPLSDNTILNSHHHLDHLYLPIIPTPTILQAFDHLNNDIKIDINNYHNNNNNNHHHNSNFLHFQNPMPETVPPSSNNNIIPSLFELDTWSSFGCVPFHLNPNQQSQTMITKTADTTTPHLILEKLINPSTWQHQAVEPTVDNLVPKVCESVEDYVCSIPFSSSAANSQHHQHEDAVACYTPGICPQDQIAVPNQVEYIDAIIMSSLPSSTTSSSSVSLYQADK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03764 341 SUPERFAMILY Homeodomain-like 23 92 IPR009057 -
Viun5g03764 341 ProSiteProfiles Myb-like domain profile. 38 88 IPR001005 -
Viun5g03764 341 PANTHER MYB DOMAIN PROTEIN 55 20 255 - -
Viun5g03764 341 SMART sant 42 90 IPR001005 -
Viun5g03764 341 Gene3D - 11 42 - -
Viun5g03764 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 92 IPR017930 -
Viun5g03764 341 FunFam Myb transcription factor 45 92 - -
Viun5g03764 341 Pfam Myb-like DNA-binding domain 43 85 IPR001005 -
Viun5g03764 341 CDD SANT 45 85 IPR001005 -
Viun5g03764 341 Gene3D - 45 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03764 Viun-Chr5 46408763 46410759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03764 21 94 MYB Transcription Factor Family AT3G13890 97.297 3.66e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun5g03764 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03764 K09422 - gmx:102662609 456.832