Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03762 ATGCAAGATAGTCCGGTGGTTGAATCAGCAAAGATTTGCAATGGGGATGCCCTAATAGACGGGGCACAGAGCATGACTAACGAAGATGAGATGCTGGATGTAGAACACGTTTTAAGGTTTGATAATGGGATGGATGAAATACAGGAATCTTTGTTACCATGCTTTGAGCAATTTCTTATGTGGCCGCCTAATGATTGCGTCACCATAGAGTGGGTTCAGGATGTGATGGTCATCCTTGAGCATGCTTCACAGAAGATGCTGCCATCTGAATTCTGTCATGTTGTGCCCACCCTTTTGGTGGACAAATTGACAGGTGCTGCTTGCAGTATTTTGTGTAAAGAACCAAACTGTGTGGAGATCAATTGCCAAGGAGAAGATTCAAGAGTAATTGTAGTTGGCGATATTCACGGGCAGATTCATGATTTAATGTTTCTTTTCAAGCATGAAGGAGTGCCCTCTGAGAACCAGATTTACGTTTTCAATGGAAATTATGTAGATAAAGGAGCTTGGGGAATTGAAGTATTTTTGGTCTTACTGGCTTGGAAGGTATTGATGCCTCACAGAGTATTTCTACTTCGCGGAAATCATGAATCGAGATATTGCACTGCGAGATATGGTTTTAAGAAGGAGGTGTGGGCCAAATATGGTGATCAAGGTGATGATGTCTACAATAAATTCCTAGAGTGTTTCAAGGAGCTTCCATTAGCTTCAGTTATTGCCAACTGTGTTTATACTACTCATGGAGGACTTTTCCGTAGCATACATGCAGCCCCTTCACAGAGACTAAAACGGAATAAAGCACATAGAGTGGATCTTGGCTCTTTAGCTGAGTTATATAAAGTTAAAAGATCCTGTGTAGATTGTCCTTATGAAGGTCCTAACATATTGTTGAGTGACGTTCTCTGGTCAAGACCATCAAACAGGTATGGTCTGAGGGATAGTACAGGTCAAAAGTTAGGTTTATGGTGGGGTCCTGATTGCACTGAGGCATTTCTAAAGAACCACAATTTAAAGCTGATTATCAGATCACATGACGAACCTGATTCAAGAGCTGGTAAAGATGATGATCTTGGGGATATGCTGAGAGGATACAGCATAGATCATGATGGAGAATCGGGAAAACTTTGTACACTTTTTAGTGCTCCAGACTATCCAAAGTTTGGTAAAAGGAGATGTAACAATAAGGGGGCATATGCCGTATTGAAGTCACCTGATTTTGCTAGTCCTTCCTTTCACTCGTTCAAAGGGACAGAAAGACCAATGGTGGATCCCTATGTTGATTTTGGTGCTAATAACATTGATTCGAGTAAACTAGACTCTTCTCAAAGTGCTTCAACCTCTACCCTTTCTGCTTCTGAAAGATTTTATCCAGAAGGGATGAGACCCGAGTTTGACTTTGGGGCATTAGGTATATACAATGCCCCATGTTGGAGTGTCGAGCTTCCTGATGGATCAGGTGGTACTCAAGTTGTGGAGGTTCCAAGGGCATCATCATTGGTGGAAGGGTTACCCCTGCCTCCAAACATACAGGAGCCACACAAGGCTGCTTATGAGTATTTGTTTGAGCTAGTTGCTGGGCTGAAACATATGATCGTAACAAGGGAGACTGAGAACATGGCCCGTGTGTCTGCTTTGAGAAGTAGAGCTAGGAAAAGAAAGGGTCAGGGATAG 1671 0.4255 MQDSPVVESAKICNGDALIDGAQSMTNEDEMLDVEHVLRFDNGMDEIQESLLPCFEQFLMWPPNDCVTIEWVQDVMVILEHASQKMLPSEFCHVVPTLLVDKLTGAACSILCKEPNCVEINCQGEDSRVIVVGDIHGQIHDLMFLFKHEGVPSENQIYVFNGNYVDKGAWGIEVFLVLLAWKVLMPHRVFLLRGNHESRYCTARYGFKKEVWAKYGDQGDDVYNKFLECFKELPLASVIANCVYTTHGGLFRSIHAAPSQRLKRNKAHRVDLGSLAELYKVKRSCVDCPYEGPNILLSDVLWSRPSNRYGLRDSTGQKLGLWWGPDCTEAFLKNHNLKLIIRSHDEPDSRAGKDDDLGDMLRGYSIDHDGESGKLCTLFSAPDYPKFGKRRCNNKGAYAVLKSPDFASPSFHSFKGTERPMVDPYVDFGANNIDSSKLDSSQSASTSTLSASERFYPEGMRPEFDFGALGIYNAPCWSVELPDGSGGTQVVEVPRASSLVEGLPLPPNIQEPHKAAYEYLFELVAGLKHMIVTRETENMARVSALRSRARKRKGQG 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03762 556 SUPERFAMILY Metallo-dependent phosphatases 90 424 IPR029052 -
Viun5g03762 556 ProSitePatterns Serine/threonine specific protein phosphatases signature. 192 197 IPR006186 GO:0016787
Viun5g03762 556 PRINTS Serine/threonine phosphatase family signature 228 254 IPR006186 GO:0016787
Viun5g03762 556 PRINTS Serine/threonine phosphatase family signature 374 390 IPR006186 GO:0016787
Viun5g03762 556 PRINTS Serine/threonine phosphatase family signature 158 185 IPR006186 GO:0016787
Viun5g03762 556 PRINTS Serine/threonine phosphatase family signature 128 155 IPR006186 GO:0016787
Viun5g03762 556 PRINTS Serine/threonine phosphatase family signature 191 215 IPR006186 GO:0016787
Viun5g03762 556 SMART pp2a_7 95 418 IPR006186 GO:0016787
Viun5g03762 556 Gene3D - 71 454 IPR029052 -
Viun5g03762 556 Pfam Calcineurin-like phosphoesterase 128 345 IPR004843 GO:0016787
Viun5g03762 556 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 66 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03762 Viun-Chr5 46392946 46397974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03762 59 339 Calmodulin-binding Proteins AT5G63870 51.370 2.14e-96 294