Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03761 ATGTCATCACTGCCCTGCGCTACAGCATTGAGAAAATGTTTGCAGGTGTGTGCATCCAGGGATATCATTCAGATATTAAGTAGGATCTCTTTTGAAGGTTTGGATGACCAAAGGATGCATTTAGTGACGAGGATGAAAGAAATTGCTCATGGGGTTATTGATAAACAACCTCAAGTTGCAATAGCTAGGCCTAACTTGCTTGCCGAAGAAGTTGGCTTTGTGGATGAAGGAATGCAAGATAGTCCGGTGGTTGAATCAGCAAAGATTTGCAATGGGGATGCCCTAATAGACGGGGCACAGAGCATGACTAACGAAGATGAGATGCTGGATGTAGAACACGTTTTAAGGTTTGATAATGGGATGGATGAAATACAGGAATCTTTGTTACCATGCTTTGAGCAATTTCTTATGTGGCCGCCTAATGATTGCGTCACCATAGAGTGGGTTCAGGATGTGATGGTCATCCTTGAGCATGCTTCACAGAAGATGCTGCCATCTGAATTCTGTCATGTTGTGCCCACCCTTTTGGTGGACAAATTGACAGGTGCTGCTTGCAGTATTTTGTGTAAAGAACCAAACTGTGTGGAGATCAATTGCCAAGGAGAAGATTCAAGAGTAATTGTAGTTGGCGATATTCACGGGCAGATTCATGATTTAATGTTTCTTTTCAAGCATGAAGGAGTGCCCTCTGAGAACCAGATTTACGTTTTCAATGGAAATTATGTAGATAAAGGAGCTTGGGGAATTGAAGTATTTTTGGTCTTACTGGCTTGGAAGGTATTGATGCCTCACAGAGTATTTCTACTTCGCGGAAATCATGAATCGAGATATTGCACTGCGAGATATGGTTTTAAGAAGGAGGTGTGGGCCAAATATGGTGATCAAGGTGATGATGTCTACAATAAATTCCTAGAGTGTTTCAAGGAGCTTCCATTAGCTTCAGTTATTGCCAACTGTGTTTATACTACTCATGGAGGACTTTTCCGTAGCATACATGCAGCCCCTTCACAGAGACTAAAACGGAATAAAGCACATAGAGTGGATCTTGGCTCTTTAGCTGAGTTATATAAAGTTAAAAGATCCTGTGTAGATTGTCCTTATGAAGGTCCTAACATATTGTTGAGTGACGTTCTCTGGTCAAGACCATCAAACAGGTATGGTCTGAGGGATAGTACAGGTCAAAAGTTAGGTTTATGGTGGGGTCCTGATTGCACTGAGGCATTTCTAAAGAACCACAATTTAAAGCTGATTATCAGATCACATGACGAACCTGATTCAAGAGCTGGTAAAGATGATGATCTTGGGGATATGCTGAGAGGATACAGCATAGATCATGATGGAGAATCGGGAAAACTTTGTACACTTTTTAGTGCTCCAGACTATCCAAAGTTTGGTAAAAGGAGATGTAACAATAAGGGGGCATATGCCGTATTGAAGTCACCTGATTTTGCTAGTCCTTCCTTTCACTCGTTCAAAGGGACAGAAAGACCAATGGTGGATCCCTATGTTGATTTTGGTGCTAATAACATTGATTCGAGTAAACTAGACTCTTCTCAAAGTGCTTCAACCTCTACCCTTTCTGCTTCTGAAAGATTTTATCCAGAAGGGATGAGACCCGAGTTTGACTTTGGGGCATTAGGTATATACAATGCCCCATGTTGGAGTGTCGAGCTTCCTGATGGATCAGGTGGTACTCAAGTTGTGGAGGTTCCAAGGGCATCATCATTGGTGGAAGGGTTACCCCTGCCTCCAAACATACAGGAGCCACACAAGGCTGCTTATGAGTATTTGTTTGAGCTAGTTGCTGGGCTGAAACATATGATCGTAACAAGGGAGACTGAGAACATGGCCCGTGTGTCTGCTTTGAGAAGTAGAGCTAGGAAAAGAAAGGGTCAGGGATAG 1902 0.4253 MSSLPCATALRKCLQVCASRDIIQILSRISFEGLDDQRMHLVTRMKEIAHGVIDKQPQVAIARPNLLAEEVGFVDEGMQDSPVVESAKICNGDALIDGAQSMTNEDEMLDVEHVLRFDNGMDEIQESLLPCFEQFLMWPPNDCVTIEWVQDVMVILEHASQKMLPSEFCHVVPTLLVDKLTGAACSILCKEPNCVEINCQGEDSRVIVVGDIHGQIHDLMFLFKHEGVPSENQIYVFNGNYVDKGAWGIEVFLVLLAWKVLMPHRVFLLRGNHESRYCTARYGFKKEVWAKYGDQGDDVYNKFLECFKELPLASVIANCVYTTHGGLFRSIHAAPSQRLKRNKAHRVDLGSLAELYKVKRSCVDCPYEGPNILLSDVLWSRPSNRYGLRDSTGQKLGLWWGPDCTEAFLKNHNLKLIIRSHDEPDSRAGKDDDLGDMLRGYSIDHDGESGKLCTLFSAPDYPKFGKRRCNNKGAYAVLKSPDFASPSFHSFKGTERPMVDPYVDFGANNIDSSKLDSSQSASTSTLSASERFYPEGMRPEFDFGALGIYNAPCWSVELPDGSGGTQVVEVPRASSLVEGLPLPPNIQEPHKAAYEYLFELVAGLKHMIVTRETENMARVSALRSRARKRKGQG 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03761 633 Pfam Calcineurin-like phosphoesterase 205 422 IPR004843 GO:0016787
Viun5g03761 633 SUPERFAMILY Metallo-dependent phosphatases 167 501 IPR029052 -
Viun5g03761 633 ProSitePatterns Serine/threonine specific protein phosphatases signature. 269 274 IPR006186 GO:0016787
Viun5g03761 633 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 134 613 - -
Viun5g03761 633 SMART pp2a_7 172 495 IPR006186 GO:0016787
Viun5g03761 633 Gene3D - 148 531 IPR029052 -
Viun5g03761 633 PRINTS Serine/threonine phosphatase family signature 235 262 IPR006186 GO:0016787
Viun5g03761 633 PRINTS Serine/threonine phosphatase family signature 305 331 IPR006186 GO:0016787
Viun5g03761 633 PRINTS Serine/threonine phosphatase family signature 205 232 IPR006186 GO:0016787
Viun5g03761 633 PRINTS Serine/threonine phosphatase family signature 268 292 IPR006186 GO:0016787
Viun5g03761 633 PRINTS Serine/threonine phosphatase family signature 451 467 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03761 Viun-Chr5 46392647 46397974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03761 136 416 Calmodulin-binding Proteins AT5G63870 51.370 5.03e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03761 K04460 - gmx:100779241 984.171