Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03760 ATGGACCACCAGAAAGAGAGAATTAAGAGTGGGTGTCAGAAGATTTTGGAAGGAATAAATTCAATGTCTCTGGCAAACTTGGATGACCAGCAAGTGCATTCTTTAGTGATGATGAGAGAAATAGCACGTGGGGTTGTTGATGACCGAGATAGAAAGGTGACTAGGAGTGATGTCATCACTGCCCTGCGCTACAGCATTGAGAAAATGGTGTGTGCATCCAGGGATATCATTCAGATATTAAGTAGGATCTCTTTTGAAGGTTTGGATGACCAAAGGATGCATTTAGTGACGAGGATGAAAGAAATTGCTCATGGGGTTATTGATAAACAACCTCAAGTTGCAATAGCTAGGCCTAACTTGCTTGCCGAAGAAGTTGGCTTTGTGGATGAAGGAATGCAAGATAGTCCGGTGGTTGAATCAGCAAAGATTTGCAATGGGGATGCCCTAATAGACGGGGCACAGAGCATGACTAACGAAGATGAGATGCTGGATGTAGAACACGTTTTAAGGTTTGATAATGGGATGGATGAAATACAGGAATCTTTGTTACCATGCTTTGAGCAATTTCTTATGTGGCCGCCTAATGATTGCGTCACCATAGAGTGGGTTCAGGATGTGATGGTCATCCTTGAGCATGCTTCACAGAAGATGCTGCCATCTGAATTCTGTCATGTTGTGCCCACCCTTTTGGTGGACAAATTGACAGGTGCTGCTTGCAGTATTTTGTGTAAAGAACCAAACTGTGTGGAGATCAATTGCCAAGGAGAAGATTCAAGAGTAATTGTAGTTGGCGATATTCACGGGCAGATTCATGATTTAATGTTTCTTTTCAAGCATGAAGGAGTGCCCTCTGAGAACCAGATTTACGTTTTCAATGGAAATTATGTAGATAAAGGAGCTTGGGGAATTGAAGTATTTTTGGTCTTACTGGCTTGGAAGGTATTGATGCCTCACAGAGTATTTCTACTTCGCGGAAATCATGAATCGAGATATTGCACTGCGAGATATGGTTTTAAGAAGGAGGTGTGGGCCAAATATGGTGATCAAGGTGATGATGTCTACAATAAATTCCTAGAGTGTTTCAAGGAGCTTCCATTAGCTTCAGTTATTGCCAACTGTGTTTATACTACTCATGGAGGACTTTTCCGTAGCATACATGCAGCCCCTTCACAGAGACTAAAACGGAATAAAGCACATAGAGTGGATCTTGGCTCTTTAGCTGAGTTATATAAAGTTAAAAGATCCTGTGTAGATTGTCCTTATGAAGGTCCTAACATATTGTTGAGTGACGTTCTCTGGTCAAGACCATCAAACAGGTATGGTCTGAGGGATAGTACAGGTCAAAAGTTAGGTTTATGGTGGGGTCCTGATTGCACTGAGGCATTTCTAAAGAACCACAATTTAAAGCTGATTATCAGATCACATGACGAACCTGATTCAAGAGCTGGTAAAGATGATGATCTTGGGGATATGCTGAGAGGATACAGCATAGATCATGATGGAGAATCGGGAAAACTTTGTACACTTTTTAGTGCTCCAGACTATCCAAAGTTTGGTAAAAGGAGATGTAACAATAAGGGGGCATATGCCGTATTGAAGTCACCTGATTTTGCTAGTCCTTCCTTTCACTCGTTCAAAGGGACAGAAAGACCAATGGTGGATCCCTATGTTGATTTTGGTGCTAATAACATTGATTCGAGTAAACTAGACTCTTCTCAAAGTGCTTCAACCTCTACCCTTTCTGCTTCTGAAAGATTTTATCCAGAAGGGATGAGACCCGAGTTTGACTTTGGGGCATTAGGTATATACAATGCCCCATGTTGGAGTGTCGAGCTTCCTGATGGATCAGGTGGTACTCAAGTTGTGGAGGTTCCAAGGGCATCATCATTGGTGGAAGGGTTACCCCTGCCTCCAAACATACAGGAGCCACACAAGGCTGCTTATGAGTATTTGTTTGAGCTAGTTGCTGGGCTGAAACATATGATCGTAACAAGGGAGACTGAGAACATGGCCCGTGTGTCTGCTTTGAGAAGTAGAGCTAGGAAAAGAAAGGGTCAGGGATAG 2064 0.4254 MDHQKERIKSGCQKILEGINSMSLANLDDQQVHSLVMMREIARGVVDDRDRKVTRSDVITALRYSIEKMVCASRDIIQILSRISFEGLDDQRMHLVTRMKEIAHGVIDKQPQVAIARPNLLAEEVGFVDEGMQDSPVVESAKICNGDALIDGAQSMTNEDEMLDVEHVLRFDNGMDEIQESLLPCFEQFLMWPPNDCVTIEWVQDVMVILEHASQKMLPSEFCHVVPTLLVDKLTGAACSILCKEPNCVEINCQGEDSRVIVVGDIHGQIHDLMFLFKHEGVPSENQIYVFNGNYVDKGAWGIEVFLVLLAWKVLMPHRVFLLRGNHESRYCTARYGFKKEVWAKYGDQGDDVYNKFLECFKELPLASVIANCVYTTHGGLFRSIHAAPSQRLKRNKAHRVDLGSLAELYKVKRSCVDCPYEGPNILLSDVLWSRPSNRYGLRDSTGQKLGLWWGPDCTEAFLKNHNLKLIIRSHDEPDSRAGKDDDLGDMLRGYSIDHDGESGKLCTLFSAPDYPKFGKRRCNNKGAYAVLKSPDFASPSFHSFKGTERPMVDPYVDFGANNIDSSKLDSSQSASTSTLSASERFYPEGMRPEFDFGALGIYNAPCWSVELPDGSGGTQVVEVPRASSLVEGLPLPPNIQEPHKAAYEYLFELVAGLKHMIVTRETENMARVSALRSRARKRKGQG 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03760 687 ProSitePatterns Serine/threonine specific protein phosphatases signature. 323 328 IPR006186 GO:0016787
Viun5g03760 687 SUPERFAMILY Metallo-dependent phosphatases 221 555 IPR029052 -
Viun5g03760 687 Pfam Calcineurin-like phosphoesterase 259 476 IPR004843 GO:0016787
Viun5g03760 687 PRINTS Serine/threonine phosphatase family signature 259 286 IPR006186 GO:0016787
Viun5g03760 687 PRINTS Serine/threonine phosphatase family signature 359 385 IPR006186 GO:0016787
Viun5g03760 687 PRINTS Serine/threonine phosphatase family signature 289 316 IPR006186 GO:0016787
Viun5g03760 687 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Viun5g03760 687 PRINTS Serine/threonine phosphatase family signature 322 346 IPR006186 GO:0016787
Viun5g03760 687 Gene3D - 203 585 IPR029052 -
Viun5g03760 687 SMART pp2a_7 226 549 IPR006186 GO:0016787
Viun5g03760 687 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03760 Viun-Chr5 46392258 46397974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03760 190 470 Calmodulin-binding Proteins AT5G63870 51.370 1.98e-95 295