Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03758 ATGGCGCGGGGGAGGATCAGGGCAAGGCTCCGTAGGAGGAGCCAACTTTACACATTTGGTTGCCTGAAGCCAACTACCACTGAAGAGTTGCCCTATCCACTTCAAGGTCCTGGCTACTCGCGAACAGTTTTCTGCAACCAGCCTCAACTCCATGAAAAGAATTCCCTATTTTATTGCAAGAATGATATATCAACCACCAAGTACAATGTCATAACGTTTCTACCTAAGGCATTGTTTGAACAGTTTCGAAGGGTTGCTAACATATACTTTCTTTTGGCTGCTTGCCTTTCGGCTTCTCCAATTTCACCTTTCAGCCCACTGAGCATGATTGCTCCTCTGGCCTTTGTTGTGGGACTCAGTATGGTGAAGGAGGCATTGGAGGATTCTCGCAGGTTCTTTCAGGATGTCAAAGTTAATCGACGGAAAGTTTGTCTCCATATAGGCAATGGGACTTTTGGCCTAAGATCGTGGCAGAAGATTGTGGTTGGGGATGTGGTCAAAGTAGAAAAAGATCAATTTTTTCCAGCCGACTTGCTTCTCTTGGCGTCAAGTTATGAGGATGGAATATGCTATGTGGAGACAATGAATTTAGATGGAGAGACCAACTTGAAGGTGAAGAGATCTTTGGAGGCTACCTTGTTTCTGGATAACGACGAGGCTTTTAAGGATTTCTCTGCAACAATATTTTGTGAAGATCCAAATCCCAATCTTTACACTTTTATTGGGAACTTTGAGCATGAAAATCAGGTTTATCCTCTTGATCCTAGTCAAATTCTCCTCAGAGATTCGAAGCTTAGGAACACTGATCATGTTTATGGAGTGGTCATTTTCACTGGACATGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAGAGAAGCACAATAGAAAAGAAGATGGACTATATCATATATACACTTTTCACTGTCCTTATATTGATATCTTTTATTAGTTCAATAGGATTTGTTGCAAAGACCAAATACCAAGCCCCAACTTGGTGGTATTTACGGCCTGACAATATTGAATATCAGTTTGATCCTGGGAAAATCGGATTGGCTGGGATGAGCCATCTGATTACTGCACTCATTCTCTATGGATATTTGATTCCTATCTCGCTCTATGTTTCAATTGAGGTTGTCAAGGTATTACAGGCAACCTTCATTGACCAAGACATTCAAATGTATGATGATGAAACTGGAACTCCAGCTGAAGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGATACCATCCTCTCTGATAAAACTGGCACTTTAACTTGCAACCAGATGGACTTTTTGAAGTGCTCCATTGCCGGTACTGCATATGGTGTTCGTTCCAGTGAGGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGAGGAGCCGGACATGGATATGTCTAATTTTTCCATTCCTAAGGAGAGTAAAGTGCCATGGGAAAATATTACTGTAGATGAAGAATCTGAACTGGGGATTGTTGCTAATTCCAAGAATGATGAAGATCAAGATCAAAGGACTTCCATAAAGGGATTTGGTTTCGAAGATGATCGCCTTATGAATGGTAACTGGATGAAAGAACCAAATGCCAATGTCCTTTTACTGTTTTTCCGGATATTAGCAATTTGTCATACGGCCATCCCTGAACTAAATGAGGAGACTGACATTTGTACTTATGAGGCCGAGTCACCTGATGAAGGGGCTTTTCTAGTAGCAGCCAGAGAATTTGGTTTTGAATTTTATAGGAGAACTCAATCAAGTGTTGTCATCCGCGAAAGATTTTCTGCCTCAGGACAATTGGTTCAAAGAGAATATAAAATTTTGAATCTGCTGGACTTTACTAGCAAAAGGAAGCGCATGTCAGTGATTGTGCGTGACGAGGAGGGAAACATCATTCTTTTTTGCAAAGGAGCTGACAGCATCATATTTGATCGACTGTCTAAGAATGGAAAAATGTATTTGGACGCTACTACTAGACATTTGAATGAATATGGAGAAGCTGGCTTGAGAACACTAGCCTTGGCCTATAGAGAGCTTGACGACCAAGAGTACTCTGATTGGAATAACAAGTTTCAGAAGGCCAAAACAGCTGTTGGAGCTGACAGAGAGGCAATGCTTGATCAGGTTTCAGATGTTATGGAAAGAGAGTTGATACTTGTTGGCGCTACTGCTGTAGAGGATAAACTACAGAAAGGGGTGCCTCAATGCATTGACAAACTTGCTCAAGCTGGTCTAAAGATCTGGGTATTGACTGGGGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGTAGTTTACTTCGACAGGGCATGAGGCAAATCTGTATCACAATGAATTCAGAAACCAATGATTCGAAAGAGGTCATCAAAGGTAACATCTTGAATCAAATCACCAATGCCTCGCAAATGATAAAGCTAGAAAAGGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTAACGTATGCTTTAGAAGATGATGTCAAACTCCAATTTTTGGGACTGGCTGTCGGCTGTGCGTCTGTTATTTGTTGTCGTGTGTCTCCAAAGCAAAAAGCACTAGTTACAAGGCTAGTGAAAGAAGGAACTGGGAAGACCACTTTGGCCATTGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTAATGGCTAGTGACTTTTCTATTGCCCAATTCCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGCTATTTCTTCTACAAAAATATAGCATTTGGCCTCACCATTTTCTATTTTGAGGCCTTTACGGGCTTCTCTGGACAATCGGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCTGTCATTTCTCTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTGTATCAGCAAGGACCCAAAAACTTGTTCTTTGACTGGTATAGAATCTTGGGATGGATGGGGAATGGTCTTTATTCCTCCCTCGTCATCTTCTTCCTTGTCATTATCATCTTCTATGACCAAGCATTCCGTGCCAATGGCCAGGTCGCAGACATGGCTGCTGTTGGTACCACAATGTTCACTTGCATCATCTGGACTGTGAATTGCCAGATTGCACTGACAATGAGCCATTTCACATGGATCCAACACCTCTTTGTCTGGGGCAGCATAACCACTTGGTACCTCTTTCTCTTGTTATATGGCATGCTTCCACCAAAATATTGCAAATCTGCCTACAAAATATTGGTGGAGGTTCTTGCTCCTGCTCCTATTTATTGGACAACAACCCTATTAGTAACAATCACATGCGTTCTTCCTTATCTCGCCCACATATCCTTGCAAAGATGTTCTCATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGACATTGAAGATCAACACATGTGGACGAGGGAGCGGTCTAAAGCAAGGCAAGAAACGAAGATTGGATTCACGGCAAGAGTGGAAGCAAAGATTAGGTATTTTAGAAGTAAATTGCAGAAGAAGCAGCAGCAGTCTTCAGTGGGCTCTTCAGTGGGCTCTTTGTCTCCATTATGA 3690 0.4184 MARGRIRARLRRRSQLYTFGCLKPTTTEELPYPLQGPGYSRTVFCNQPQLHEKNSLFYCKNDISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMVKEALEDSRRFFQDVKVNRRKVCLHIGNGTFGLRSWQKIVVGDVVKVEKDQFFPADLLLLASSYEDGICYVETMNLDGETNLKVKRSLEATLFLDNDEAFKDFSATIFCEDPNPNLYTFIGNFEHENQVYPLDPSQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISFISSIGFVAKTKYQAPTWWYLRPDNIEYQFDPGKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFIDQDIQMYDDETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLEEPDMDMSNFSIPKESKVPWENITVDEESELGIVANSKNDEDQDQRTSIKGFGFEDDRLMNGNWMKEPNANVLLLFFRILAICHTAIPELNEETDICTYEAESPDEGAFLVAAREFGFEFYRRTQSSVVIRERFSASGQLVQREYKILNLLDFTSKRKRMSVIVRDEEGNIILFCKGADSIIFDRLSKNGKMYLDATTRHLNEYGEAGLRTLALAYRELDDQEYSDWNNKFQKAKTAVGADREAMLDQVSDVMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMRQICITMNSETNDSKEVIKGNILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDVKLQFLGLAVGCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLVIFFLVIIIFYDQAFRANGQVADMAAVGTTMFTCIIWTVNCQIALTMSHFTWIQHLFVWGSITTWYLFLLLYGMLPPKYCKSAYKILVEVLAPAPIYWTTTLLVTITCVLPYLAHISLQRCSHPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRYFRSKLQKKQQQSSVGSSVGSLSPL 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03758 1229 Gene3D - 722 920 IPR023214 -
Viun5g03758 1229 FunFam Phospholipid-transporting ATPase 726 920 - -
Viun5g03758 1229 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 42 1189 - -
Viun5g03758 1229 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Viun5g03758 1229 CDD P-type_ATPase_APLT_Dnf-like 61 1040 - -
Viun5g03758 1229 NCBIfam HAD-IC family P-type ATPase 847 961 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun5g03758 1229 FunFam Phospholipid-transporting ATPase 119 289 - -
Viun5g03758 1229 SFLD p-type atpase 405 931 IPR044492 -
Viun5g03758 1229 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1148 IPR023298 -
Viun5g03758 1229 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1158 IPR032630 -
Viun5g03758 1229 SUPERFAMILY Calcium ATPase, transduction domain A 143 287 IPR008250 -
Viun5g03758 1229 SFLD Haloacid Dehalogenase 405 931 - -
Viun5g03758 1229 Gene3D - 420 434 IPR023214 -
Viun5g03758 1229 SUPERFAMILY HAD-like 411 924 IPR036412 -
Viun5g03758 1229 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Viun5g03758 1229 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Viun5g03758 1229 Pfam Cation transport ATPase (P-type) 549 653 - -
Viun5g03758 1229 NCBIfam phospholipid-translocating P-type ATPase 58 1166 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Viun5g03758 1229 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 525 688 IPR023299 GO:0000166
Viun5g03758 1229 Gene3D - 114 289 - -
Viun5g03758 1229 Gene3D - 435 472 IPR023299 GO:0000166
Viun5g03758 1229 Gene3D - 594 700 IPR023299 GO:0000166
Viun5g03758 1229 FunFam Phospholipid-transporting ATPase 593 724 - -
Viun5g03758 1229 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Viun5g03758 1229 MobiDBLite consensus disorder prediction 1210 1229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03758 Viun-Chr5 46372713 46379850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03758 1 1228 Primary Pumps ATPases AT1G17500 74.269 0.0 1903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03758 K01530 - gmx:100778710 2194.47