Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03705 ATGGATAAGGACAAATCTCTAGGTCACGGTGGAGGTTTGCCACCTCCCTCGGGACGTTATTCGGGTTACTCACCTCCCGGAACTGCGTTCAGTGTGAAATCTGAGCCGCCGCCGTCGACGACGACGACGTCGTCGTATCCGCCACTGGCTCCGGGAGTTTCTACACCGGAGTCTAGTGGGTTTAGTCATGATATTAGCAGAATGCCCGATAATCCTCCGAGAAATAGAGGTCACAGGCGTGCTCATTCCGAGATTCTTACCCTACCGGACGATATTAGCTTTGACAGTGACCTTGGTGTGGTTGGAGGTGCCGATGGACCTTCCTTCTCCGATGAAGCCGAGGAGGACTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCGTCGTCGGCGACGTCCACGTTTCAAATGGGCGAACCGTCTGGTGCAATGGGAGCGTCGGGTTCGGCATCGGCATCAGGAGCACCCACCTCTTCTGCAGAGAATAGTGCTGTTGGAACACTTGAACGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGATGGATCAACTACCATCAAGCCTGAGCTGCTGGTTTCTGGTTCGGAAGACTTGTCTGCGGCGGATTCCAAAAAAGCAATGTCAGCTGCTAAGCTTGCTGAGCTTGCCTTGATTGACCCCAAACGTGCGAAAAGGATATGGGCAAATAGACAGTCTGCTGCGAGATCAAAAGAGAGGAAGATGCGGTACATTGCTGAGCTTGAAAGGAAGGTACAAACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAAGTCTCTTGCAGAGGGATACAAATGGCTTGAATTCTGAGAACAGTGAACTGAAGCTGCGGTTACAAACCATGGAGCAACAAGTTCACTTGCAAGATGCACTAAATGACGCATTAAAAGAGGAAATTCAGCATTTGAAAATACTGACTGGACAAGCTATGCCACCTAATGGAGGAGGACCTATGCTGAACTTTGCCTCTTTTGGAGGGGGGCAGCAATTCTATCCCAATAATCATGCCATGCACACCCTTCTAGCTGCACAGCAGTTTCAACAACTCCAAATTCATCCTCAGAAGCAGCACCAATTTCAGCAGCTTCAACAACAAATGCTGCAACAGCAGCAGCAACAACAACAGCAGCAGCAGAGGGAACAGCAGCACCAACAATCAAGCGACATGAAAATGAGAGAAGCTTCACCTACTCCGTGTCCTCCCAAAGATAATGCGTTGTCAGATGTAAATCCTTCAGGAGCTAAGGACTGTTGA 1284 0.4914 MDKDKSLGHGGGLPPPSGRYSGYSPPGTAFSVKSEPPPSTTTTSSYPPLAPGVSTPESSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDEAEEDLLSMYLDMDKFNSSSATSTFQMGEPSGAMGASGSASASGAPTSSAENSAVGTLERPRVRHQHSQSMDGSTTIKPELLVSGSEDLSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLSLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNGGGPMLNFASFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQHQFQQLQQQMLQQQQQQQQQQQREQQHQQSSDMKMREASPTPCPPKDNALSDVNPSGAKDC 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03705 427 MobiDBLite consensus disorder prediction 380 402 - -
Viun5g03705 427 FunFam probable transcription factor PosF21 222 275 - -
Viun5g03705 427 Coils Coil 369 390 - -
Viun5g03705 427 MobiDBLite consensus disorder prediction 131 166 - -
Viun5g03705 427 Coils Coil 239 308 - -
Viun5g03705 427 CDD bZIP_plant_RF2 224 273 IPR044759 GO:0003700|GO:0006355
Viun5g03705 427 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Viun5g03705 427 MobiDBLite consensus disorder prediction 1 88 - -
Viun5g03705 427 SUPERFAMILY Leucine zipper domain 223 274 IPR046347 GO:0003700|GO:0006355
Viun5g03705 427 MobiDBLite consensus disorder prediction 131 191 - -
Viun5g03705 427 MobiDBLite consensus disorder prediction 33 65 - -
Viun5g03705 427 Gene3D - 222 275 - -
Viun5g03705 427 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 25 397 - -
Viun5g03705 427 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 284 IPR004827 GO:0003700|GO:0006355
Viun5g03705 427 MobiDBLite consensus disorder prediction 69 86 - -
Viun5g03705 427 Pfam bZIP transcription factor 223 281 IPR004827 GO:0003700|GO:0006355
Viun5g03705 427 MobiDBLite consensus disorder prediction 380 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03705 Viun-Chr5 46067070 46070538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03705 19 353 bZIP Transcription Factor Family AT1G06070 72.619 5.20e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun5g03705 bZIP_1 2.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03705 - - gmx:100786738 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03705 5 46067070 46070538 Viun5g03705 5 46067070 46070538 ECH
Viun5g03705 5 46067070 46070538 Viun11g02304 11 37396671 37401658 PCT