Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03704 ATGGATAAGGACAAATCTCTAGGTCACGGTGGAGGTTTGCCACCTCCCTCGGGACGTTATTCGGGTTACTCACCTCCCGGAACTGCGTTCAGTGTGAAATCTGAGCCGCCGCCGTCGACGACGACGACGTCGTCGTATCCGCCACTGGCTCCGGGAGTTTCTACACCGGAGTCTAGTGGGTTTAGTCATGATATTAGCAGAATGCCCGATAATCCTCCGAGAAATAGAGGTCACAGGCGTGCTCATTCCGAGATTCTTACCCTACCGGACGATATTAGCTTTGACAGTGACCTTGGTGTGGTTGGAGGTGCCGATGGACCTTCCTTCTCCGATGAAGCCGAGGAGGACTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCGTCGTCGGCGACGTCCACGTTTCAAATGGGCGAACCGTCTGGTGCAATGGGAGCGTCGGGTTCGGCATCGGCATCAGGAGCACCCACCTCTTCTGCAGAGAATAGTGCTGTTGGAACACTTGAACGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGATGGATCAACTACCATCAAGCCTGAGCTGCTGGTTTCTGGTTCGGAAGACTTGTCTGCGGCGGATTCCAAAAAAGCAATGTCAGCTGCTAAGCTTGCTGAGCTTGCCTTGATTGACCCCAAACGTGCGAAAAGGATATGGGCAAATAGACAGTCTGCTGCGAGATCAAAAGAGAGGAAGATGCGGTACATTGCTGAGCTTGAAAGGAAGGTACAAACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAAGTCTCTTGCAGAGGGATACAAATGGCTTGAATTCTGAGAACAGTGAACTGAAGCTGCGGTTACAAACCATGGAGCAACAAGTTCACTTGCAAGATGCACTAAATGACGCATTAAAAGAGGAAATTCAGCATTTGAAAATACTGACTGGACAAGCTATGCCACCTAATGGAGGAGGACCTATGCTGAACTTTGCCTCTTTTGGAGGGGGGCAGCAATTCTATCCCAATAATCATGCCATGCACACCCTTCTAGCTGCACAGCAGTTTCAACAACTCCAAATTCATCCTCAGAAGCAGCACCAATTTCAGCAGCTTCAACAACAAATGCTGCAACAGCAGCAGCAACAACAACAGCAGCAGCAGAGGGAACAGCAGCACCAACAATCAAGCGACATGAAAATGAGAGAAGCTTCACCTACTCCGTGTCCTCCCAAAGATAATGCGTTGTCAGATGGGTAG 1260 0.4937 MDKDKSLGHGGGLPPPSGRYSGYSPPGTAFSVKSEPPPSTTTTSSYPPLAPGVSTPESSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDEAEEDLLSMYLDMDKFNSSSATSTFQMGEPSGAMGASGSASASGAPTSSAENSAVGTLERPRVRHQHSQSMDGSTTIKPELLVSGSEDLSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLSLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNGGGPMLNFASFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQHQFQQLQQQMLQQQQQQQQQQQREQQHQQSSDMKMREASPTPCPPKDNALSDG 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03704 419 Coils Coil 369 390 - -
Viun5g03704 419 MobiDBLite consensus disorder prediction 131 166 - -
Viun5g03704 419 Coils Coil 239 308 - -
Viun5g03704 419 Gene3D - 222 275 - -
Viun5g03704 419 CDD bZIP_plant_RF2 224 273 IPR044759 GO:0003700|GO:0006355
Viun5g03704 419 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Viun5g03704 419 MobiDBLite consensus disorder prediction 376 402 - -
Viun5g03704 419 MobiDBLite consensus disorder prediction 1 88 - -
Viun5g03704 419 SUPERFAMILY Leucine zipper domain 223 274 IPR046347 GO:0003700|GO:0006355
Viun5g03704 419 MobiDBLite consensus disorder prediction 33 65 - -
Viun5g03704 419 MobiDBLite consensus disorder prediction 131 191 - -
Viun5g03704 419 MobiDBLite consensus disorder prediction 376 419 - -
Viun5g03704 419 Pfam bZIP transcription factor 223 281 IPR004827 GO:0003700|GO:0006355
Viun5g03704 419 FunFam probable transcription factor PosF21 222 275 - -
Viun5g03704 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 284 IPR004827 GO:0003700|GO:0006355
Viun5g03704 419 MobiDBLite consensus disorder prediction 69 86 - -
Viun5g03704 419 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 25 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03704 Viun-Chr5 46066414 46070538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03704 19 353 bZIP Transcription Factor Family AT1G06070 72.619 5.66e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun5g03704 bZIP_1 2.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03704 - - gmx:100786738 567.77