Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03687 ATGGATCACGAATCTGTCCAGGGATTTGACTCAGATGATAGTGACCTTGATATGCAAGCAGAAATTAGTGAGAAACACGGGAAAATAGATGAATTTTCAAAAAACCTAGAATTATGTGGAAGTGAAGATGAGAAGTTTGTCGAACTACCTGCAACAGAAATTCCAACAGATATAGAAGCTGTTGAACCATTCATAGGCATGGAGTTCAATTCAAGAGAGGAAGCGAGAGAATTCTACATTGCCTATGGTAGGCGAATAGGGTTTACGGTACGAATACATCACAACCGTCGTTCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGTGCAAAAAAGTATGTACACAGAAAAGATAGGGTGCTGCCTCCACCACCAGCCACTCGTGAAGGTTGTCAGGCCATGATAAGGCTGGCTTTACGGGATGGAGGGAAGTGGGTTGTCACCAAATTTGTAAAGGAGCATAATCATAAGCTAATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGGTTAGCGAGGATGAGAAGGATAGAAGAATCCGTGAGCTATCACTTGAGTTGTACAATGAAAGGCAAAAGTGCAAACGTCGTTGTGCTGCATATGAAGAGCAGTTAAATTTGATTCTGAATGATTTAGAGAAGCACACCGAACATATTTCTGAAAAAGTTGCTGCTGTAGTACGAAGTATTAGAGAGATTGAGGAAGAAAAATCAGATTCAGATAGTGGGTAA 765 0.4131 MDHESVQGFDSDDSDLDMQAEISEKHGKIDEFSKNLELCGSEDEKFVELPATEIPTDIEAVEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKHLVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNLILNDLEKHTEHISEKVAAVVRSIREIEEEKSDSDSG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03687 254 MobiDBLite consensus disorder prediction 1 23 - -
Viun5g03687 254 Coils Coil 202 229 - -
Viun5g03687 254 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
Viun5g03687 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03687 Viun-Chr5 45988623 45992646 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun5g03687 FAR1 6.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03687 - - gmx:100813124 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03687 5 45988623 45992646 Viun5g03687 5 45988623 45992646 ECH