Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03647 ATGAGAAACGGATTCTATGAAAAGTTGGAGTCTGAGCTTCAAGGTTCAAGGAATACTTATTATGTCGGTGGGCTTATGGCTTTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAAATTTTCAAATAGCAGTGATTTGCCAGAGTTTTCTTACACTAAGAGTTTGTTTCCCTTGCAAACTGAGTTCCAGAAAAAGGAGCCTAAAGAACTAGGTGAATTGCCTGGGGTGCAATTTCCCGATTTGCCAACTTTGAATAGCTATTTAAAGCATTGGGGAACTGATCCAGTCACTGAAAACAGAACTCTTTACACTTGGATAAATGAAGGAGGAACAGTGGGTGGCAAGAGAACATATAGAGAACAACACTTGAATGCTTCTTGTATTGCACATAAGCTCTTAACAAGTGAAAAGCCAGTGATCAAGCCTGGTGACAGGGTTCTCCTAGTTTATGTTCCTGGCCTAGATTTCATTGATGCCTTCTTTGGATGTTTAAGAGCAAAAGTTTTACCAGTCCCAGTTCTTCCCCCGGACCCCATGCAAAGAGGTGGACAAGCACTTCTAAAAATTGAGAACATTGCCAAGTCATGTGGCATAGTGGCGATTTTATCAACAGTGGCTTATCATTCAGCAGTACGTGTAGGTCTAGTGAAAAGTATGATCTCATTAACTGGAAAGATTGGGAAATCCTCAGCTCAATGGCCTAAACTTCCTTGGCTGCACACTGACACATGGGTCAATAATAACTCAAGAAATTTGGCTTTGGGAGATGCTGGTGAGGATCAATGTGAATCCAAGCCTGGTGATATATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTTATTCACAATGTGAAGTTGATGAAAAGTATATACAAGAGCACCTCAAGGACCATGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTCACCGCTCTTGTTAGTGGTGGATCTGCTGTGCTTTTCTCACCGATAACATTTATTAAGAAACCACTCTTGTGGCTTGAAACCATGAGCAAGTATCAAGCAACTCACAGTGCTGGCCCCAACTTTGCTTTTGAGTTGGTGGTTCGAAGGTTAGAGTCTGAAAAAGACAAGCTTCAGAATTTAAACCTTTCATCCATGATTTTTCTCATGATTGCCGCTGAGCCAGTGAGGCAGAAGACCCTGAAAAGGTTTCTTGATTTAACTGCTTCTTTTGGTTTATCTCAGAAGGTGATGGCTCCAGGATATGGCTTGGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGTGAAGGGTATCCTATTCTTGTTGACTGGCAGGGAAGAGTTTCTTGTGGATACATTCACCCTGGTGATGCAGATATTGACATTAGAATAGTTGATCCAGAGAATGGTGAAGAGCTTCGAGAAGACGGAAAGGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCTGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATGAGCTTCAGAATCATCCTGGACGAAACTACACAAGAACTGGAGACTTGGGAAGAATAATTGATGGGAAGCTATTCATCACAGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCTGCAGATGTTGAGAAAACAGTGGAGAGTTCATCTGAATTTCTTCGTCCTGGGTGTTGTGCAGTCATTGGTGTCCCTGAGGAGGTTCTATCAGCAAAGGGGATTACCCTGCCTGATGGATCTGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGCTAAAGCGGTGAGCAAAGATGTGATTGAGCATATTCAGACTCGTGTGGCAGAAGAACATGGAGTAAGTGTTGCTTCTGTCAAGCTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTTGCGGATGATACACTGAATTTGGTGCCTCAACCTATTCAGACAAGGAAATCACTGTTAAGATCATTTACTACAGGAACATGCACAGAAGGAAGAACACCCCGGGCCCAGCTGGTGAGAAGTAGTAATCCTCTGCCTATTCCAAGAATCAGTAACAAGGAAATTGTGGAACACTTGAAAAGGCTTGTTTCTGAGCACTCTGGAATCCCAGTCAAAGATATCTTAGTCACTGAAAACATGTCTGCATACGGAATTGATTCAATTGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTGGGTGTGCCAGTTGCAGCTATAGATGTCTTCACTGCATCATGCATTCAAGAATTGGCTAACTTCTCCGAGAATCTTATGTTAAAGTCTCAACCTGAACTTATGAGCAATTCCCATGCTCCAGTTGCTGAAATTGACACTACTGAAATTGTTGTGGATGTGTCCAGGTCTCGCCAATGGGGTATCCGTTTACTTCAACTCCTAGCACTAATTTATGTTTCTATCATGCTGTTTTCTCCTGCTTATCTATCCATCACTGCTTTTCAAAGTTTCATACCAAATGCCAGTGAATCGGTATATGGAATGCCTTGGTCAAACTATTTGCTTTCCTTGACTTTGGCACCTCTTTCTTGGATCCTTTGCATGGTTTCTACTTGCATTTGCATTTCACTTTTGGGGAACTCTTTCTTGAGGCCAAACTATGCCCTGACACCCGAAATATCCATCTATTCCATGGATTTTGTAAAGTGGTGGGCGCTGTATAAAACTCAGGAAATTTCTTCAAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATTGGATCCTTAGTTTTGCTGGACACAGTTGATATCACAGACCCTTCTCTGGTTTCAATTGGAGATGAAGTTTCCATTGCTGAGGGGGTTTTGATTCAAAGCCATGAGGTGAAGAATGGAATTCTAAGTCTCCTCCCTATTAGGATAGGTAAAAATTCTTCAATTGGGCCTTATTCTACCATTCAGAGAGGAAGTGTGATTAAAGAAGGATCTGAAGTAGAACCCTTGCAAAAGATTGAAGGAGGACAACATGTACCCAAACCTGCTAAGCTTAATAACGTTAAAGAGGTCAGTACATGCAAATTGCTGAAATAA 3189 0.418 MRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKKFSNSSDLPEFSYTKSLFPLQTEFQKKEPKELGELPGVQFPDLPTLNSYLKHWGTDPVTENRTLYTWINEGGTVGGKRTYREQHLNASCIAHKLLTSEKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRVGLVKSMISLTGKIGKSSAQWPKLPWLHTDTWVNNNSRNLALGDAGEDQCESKPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMKSIYKSTSRTMLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPITFIKKPLLWLETMSKYQATHSAGPNFAFELVVRRLESEKDKLQNLNLSSMIFLMIAAEPVRQKTLKRFLDLTASFGLSQKVMAPGYGLAENCVFVSCAFGEGYPILVDWQGRVSCGYIHPGDADIDIRIVDPENGEELREDGKEGEIWISSPSAGIGYWGKEELSQKTFRNELQNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVIGVPEEVLSAKGITLPDGSDQVGLVVVAEVRDAKAVSKDVIEHIQTRVAEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADDTLNLVPQPIQTRKSLLRSFTTGTCTEGRTPRAQLVRSSNPLPIPRISNKEIVEHLKRLVSEHSGIPVKDILVTENMSAYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASCIQELANFSENLMLKSQPELMSNSHAPVAEIDTTEIVVDVSRSRQWGIRLLQLLALIYVSIMLFSPAYLSITAFQSFIPNASESVYGMPWSNYLLSLTLAPLSWILCMVSTCICISLLGNSFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGARIGSLVLLDTVDITDPSLVSIGDEVSIAEGVLIQSHEVKNGILSLLPIRIGKNSSIGPYSTIQRGSVIKEGSEVEPLQKIEGGQHVPKPAKLNNVKEVSTCKLLK 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03647 1062 ProSitePatterns Putative AMP-binding domain signature. 278 289 IPR020845 -
Viun5g03647 1062 CDD FAAL 102 670 IPR040097 GO:0008610
Viun5g03647 1062 SUPERFAMILY Trimeric LpxA-like enzymes 943 1045 IPR011004 -
Viun5g03647 1062 ProSitePatterns Phosphopantetheine attachment site. 749 764 IPR006162 -
Viun5g03647 1062 Gene3D - 551 679 IPR045851 -
Viun5g03647 1062 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 14 1035 - -
Viun5g03647 1062 SUPERFAMILY Acetyl-CoA synthetase-like 97 674 - -
Viun5g03647 1062 Gene3D - 78 550 IPR042099 -
Viun5g03647 1062 SUPERFAMILY ACP-like 717 794 IPR036736 -
Viun5g03647 1062 Gene3D - 713 793 IPR036736 -
Viun5g03647 1062 Gene3D Hexapeptide repeat proteins 956 1058 - -
Viun5g03647 1062 Gene3D - 1 47 IPR036188 -
Viun5g03647 1062 Pfam AMP-binding enzyme 119 556 IPR000873 -
Viun5g03647 1062 Pfam Phosphopantetheine attachment site 726 789 IPR009081 -
Viun5g03647 1062 ProSiteProfiles Carrier protein (CP) domain profile. 720 794 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03647 Viun-Chr5 45688326 45691621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03647 274 589 Monolignol Biosynthesis Gene Families AT1G20480 26.183 1.63e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03647 - - vun:114184777 2100.09