Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03646 ATGTTTTCTGATATCCCATCAAATCCTATTTTCTTTACCATTTCGTTTTCCTGCGCGTACTTGCTTCATGGTCTCATACTCACCTCTCTCACCTGCGCCTTGACCCGTTTGCTCAAATTCAGTCAAAACCAAAGCCATTTTAAAACCTGGCTCAGACATCAATTGACCATTTCCTGCCACCAAAGATTTGCCAAGCTTCTCTCGGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCACTGTTCCATTAGAGCCATCAACCCAGTATCAAACCCCGAGTTAATGTCAATAGGTGATGGAGTCCATCTTGGTGATTTTAGCAAGATAATCACCGGTTTCTACTATTCAAACGGATATGCTTGTGGAAAAATAGAGGTTCAGGAAAATTCAGTAATGGGAAGTCAAAGCCTGATCCTCCCAGGCTCTGTTGTAGAAAAGAATGTCATTCTTGGTGCTCTTTCAGTTGCTCCAATGAATTCCATACTCCATGAGGGTAGCGTGTATATTGGATCTCAAACCCGAGTTGCAATCAGGAACTCTTCAAACTCTTTAGATGAACGGATAGAGGAGATGAACACGGAATACAAGAAAGTGGTTGCAAATATGGCTGCAAATTTAGCTGCAACAACTATCAATGTCAAAGCAAGATACTTCCACCGCATTGGTGTCAGCGGAAAGGGGCACTTGAAAATCTATGAAAAACTTGATGGCATTCCACTGCACAAGGTTTTTCAACCTGGTAAAAGCTACCCCGTCATGGTAAGACACAGTAATAGCTTGAGTGCTGATGATGATGCTAGGATCGATGCACGTGGTGCATCTTTGAGGATTCTTTCTGATGCACCCGATTCTAACCATGTCCCCCTCATTGACCTGACACTAAAAACTGGCAATGCGTTTTATGCTCGCACTATTGCTGATTTTGCAAGCTGGCTTGTGTGTGGACTTGCTGCGAGAGAGGAACTTGTGAAGCGTACCCCACATGTTCGTGACGCAGTGTGGAATTCACTCAGACATGCTCACTCATATGCTGAATTGCATTACTACTCAAACATTTGCAGGCTCATGCGCTTCACTGATGGACAAGAAATGTACGTGAAGTTTAAGATAAGGCCTATTGACACAAGCATTGGTGAGGACACAGGTAAGGTAAAACCAACTGGGATTCTTCCACCCGAAACAGGTGCAATCCCAAGGGATGAAAATGATACACGTCCGTTACTTTTCCTTGCTGAAGATTTTCAACGGCGCGTGAGTTCCCCCGGTGGAGTTCGCTATGTCTTCCAAGTGCAACTCCGAGCAGTGCCGGAAGATGAAGCAACACGTGACATTGCACTAGACTGCACCAAACCATGGAATGAGAGTGAGTTCCCTTACCTTGATGTTGGAGAGATAAACATCAATGAGAATCTCTCAAGGGAAGAATCAGACAGGCTTGAATTTAACCCCTATCTCAAAAGCCACGAGTTGGATGTGATCCCTGCCACTTCCAACACCCAAAGTGCCTCAATCGATCATGGCCGCTCATTGATCTACGAAATTTGCCAGCACGTGCGTAATGGACTGCCACTCCCAGTCTCTTGGAGAAACCTCGTAGAACAATCTAGCGTTAAGGTAGACTTGTCCTGCTGTCCTGTCGCAGCATCTGTAGCAACATCAAAGCCCAAAAAGGAGACAAAAGTGGTGACAACCTTAACCTTAACAAGAACCTGGTACCAGACATTCTCGGCGGTTTTCACCCAACCGTTGCTACAAGCAGTTTTACCTTACACGGTGGTGGGTTTGTCTGTTTTTTCCCCTTTGAACTTTGTGATGAACATGAAGAACGCTGAGAAAGTCTCGGTGCAATGGTTGTTTCCTTTGTTTTGGATTCTCTCGGGTGTTATGGGCGCTCTGGCATGTGTTGTGGCGAAATGGGTTCTGGTGGGAAGGAAGAGAGAGGGTGAGAGAGTAGCCTTGTGGAGCAAAAGGGTGACCATGGATAGCACGTGGCAAGCCATTAGAACGTTGGTTGGGGAGTACTTCATGGACATAGGAAGTGGGTCGTTTTTGTTTGTGTTGTGGATGAGGTTGATGGGTGCAGAGATAGACATGGATGGTGATGTTTACGTTGACAGCATGGGGGCTTTGTTGAACCCAGAAATGGTGAAGATTGAGAGAGGAGGGAGTGTGGGAAGAGAAGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGTGGAATCAAAATTGGTGAAGATGGGTTTGTGGGAAGTAGGGCCGTGATAATGCCTGGTGTTCATGTGGAGAATGAAGCCAATCTCCCAGTCTTGTCTCTTGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA 2391 0.4538 MFSDIPSNPIFFTISFSCAYLLHGLILTSLTCALTRLLKFSQNQSHFKTWLRHQLTISCHQRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFYYSNGYACGKIEVQENSVMGSQSLILPGSVVEKNVILGALSVAPMNSILHEGSVYIGSQTRVAIRNSSNSLDERIEEMNTEYKKVVANMAANLAATTINVKARYFHRIGVSGKGHLKIYEKLDGIPLHKVFQPGKSYPVMVRHSNSLSADDDARIDARGASLRILSDAPDSNHVPLIDLTLKTGNAFYARTIADFASWLVCGLAAREELVKRTPHVRDAVWNSLRHAHSYAELHYYSNICRLMRFTDGQEMYVKFKIRPIDTSIGEDTGKVKPTGILPPETGAIPRDENDTRPLLFLAEDFQRRVSSPGGVRYVFQVQLRAVPEDEATRDIALDCTKPWNESEFPYLDVGEININENLSREESDRLEFNPYLKSHELDVIPATSNTQSASIDHGRSLIYEICQHVRNGLPLPVSWRNLVEQSSVKVDLSCCPVAASVATSKPKKETKVVTTLTLTRTWYQTFSAVFTQPLLQAVLPYTVVGLSVFSPLNFVMNMKNAEKVSVQWLFPLFWILSGVMGALACVVAKWVLVGRKREGERVALWSKRVTMDSTWQAIRTLVGEYFMDIGSGSFLFVLWMRLMGAEIDMDGDVYVDSMGALLNPEMVKIERGGSVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVIMPGVHVENEANLPVLSLAMKGEIVRSR 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03646 796 SUPERFAMILY Heme-dependent catalase-like 198 529 IPR020835 GO:0020037
Viun5g03646 796 Gene3D Hexapeptide repeat proteins 648 781 - -
Viun5g03646 796 Coils Coil 188 208 - -
Viun5g03646 796 SUPERFAMILY Trimeric LpxA-like enzymes 70 183 IPR011004 -
Viun5g03646 796 SUPERFAMILY Trimeric LpxA-like enzymes 642 784 IPR011004 -
Viun5g03646 796 PANTHER AMINE OXIDASE 60 796 - -
Viun5g03646 796 ProSiteProfiles catalase family profile. 154 796 IPR018028 GO:0004096|GO:0006979|GO:0020037
Viun5g03646 796 Gene3D Catalase core domain 182 534 - -
Viun5g03646 796 Gene3D Hexapeptide repeat proteins 49 181 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03646 - - vra:111241452 1500.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03646 5 45685571 45687990 Viun5g03646 5 45685571 45687990 ECH
Viun5g03646 5 45685571 45687990 Viun11g02235 11 37077343 37084125 PCT