Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03617 ATGATGATTGATAAACAACAGCACCCAACGATCGAACAAAAGCTTGCTGGCCAGCTTCACTCGAGATCCAGCTCCAACCTTTCCCCACATGTTGGAACTTGTTACGGAGGTTTGAAAAGGCTAGCTCTGTTTCAGCAGCGATTCTCTCCTGAAAATTATTCAAATGCAGGGTTACAGTTCCCTGTCATGCCCGCATGCAATGCCACAAACTACATGCATTCTGCAGGTTCACCTGTGTTCGTCCCATCCCCTTCGGAGAAAAACTGGGGAAGCTTTGCCACCGATTTTCTCATGGGTGGAGTTTCTGCGGCAGTGTCCAAGAGTGCGGCTGCTCCTATTGAGCGTGTAAAGCTTCTCATTCAAAATCAGGATGAGATGATCAAAGCGGGCCGGCTCTCTGAACCCTACAAGGGCATTGGAGATTGCTTTGGAAGAACAATCAAAGATGAAGGGTTTGTTTCATTGTGGAGAGGGAACACTGCTAATGTTATCCGTTACTTCCCAACACAGGCCTTGAATTTTGCATTTAAAGACTACTTTAAGAAGCTGTTCAACTTCAAGAAAGACAGGGATGGATACTGGAAATGGTTTGCAGGGAACATAGCATCTGGTGGTGCAGCAGGAGCTGTGTCTTCGGTGTTTGTATATTCATTGGATTACGCTCGAACCCGCCTCGCCAATGATGCCAAGGCTGGAAAAAAGGGTGGTGGAGAGAGGCAATTCAATGGCTTGATCGATGTCTACAGGAAGACTCTTCAATCAGACGGTGTTGCTGGCCTCTACCGTGGCTTCAACGTTTCTTGCGTTGGAATCATTGTCTACCGTGGTTTATACTTTGGCATGTATGATTCTCTGAAACCAGTGCTCTTGGTGGGAACTTTGGAGGATAGTTTCTTGGCTAGCTTTGCTTTGGGGTGGGTGGTTACTATCAGTGCAAGCATTGCCTCGTACCCGTTGGATACGGTTCGCAGAAGAATGATGATGACATCGGGTGAAGCTGTGAAGTACAAAAGCTCTTTGGATGCATTGTCGCAAATTGTGAAGAATGAAGGTTCAAAATCTCTCTTCAAGGGTGCCGGCGCAAACATCCTTCGTGCAGTTGCAGGTGCTGGTGTGCTTGCTGGTTATGACAAACTTCAGTTACTTGTTCTTGGAAAGAAGTATGGTTCTGGTGGGGCTTGA 1182 0.4695 MMIDKQQHPTIEQKLAGQLHSRSSSNLSPHVGTCYGGLKRLALFQQRFSPENYSNAGLQFPVMPACNATNYMHSAGSPVFVPSPSEKNWGSFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFVSLWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNIASGGAAGAVSSVFVYSLDYARTRLANDAKAGKKGGGERQFNGLIDVYRKTLQSDGVAGLYRGFNVSCVGIIVYRGLYFGMYDSLKPVLLVGTLEDSFLASFALGWVVTISASIASYPLDTVRRRMMMTSGEAVKYKSSLDALSQIVKNEGSKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03617 393 FunFam ADP,ATP carrier protein, mitochondrial 93 389 - -
Viun5g03617 393 Gene3D Mitochondrial carrier domain 93 389 IPR023395 -
Viun5g03617 393 PRINTS Adenine nucleotide translocator signature 169 181 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun5g03617 393 PRINTS Adenine nucleotide translocator signature 195 208 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun5g03617 393 PRINTS Adenine nucleotide translocator signature 92 104 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun5g03617 393 PRINTS Adenine nucleotide translocator signature 136 157 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun5g03617 393 PRINTS Adenine nucleotide translocator signature 301 317 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun5g03617 393 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 81 392 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun5g03617 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 195 288 IPR018108 -
Viun5g03617 393 PRINTS Mitochondrial carrier protein signature 158 178 IPR002067 GO:0055085
Viun5g03617 393 PRINTS Mitochondrial carrier protein signature 261 279 IPR002067 GO:0055085
Viun5g03617 393 PRINTS Mitochondrial carrier protein signature 108 122 IPR002067 GO:0055085
Viun5g03617 393 PRINTS Mitochondrial carrier protein signature 305 327 IPR002067 GO:0055085
Viun5g03617 393 PRINTS Mitochondrial carrier protein signature 210 228 IPR002067 GO:0055085
Viun5g03617 393 PRINTS Mitochondrial carrier protein signature 95 108 IPR002067 GO:0055085
Viun5g03617 393 Pfam Mitochondrial carrier protein 89 187 IPR018108 -
Viun5g03617 393 Pfam Mitochondrial carrier protein 194 289 IPR018108 -
Viun5g03617 393 Pfam Mitochondrial carrier protein 297 383 IPR018108 -
Viun5g03617 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 296 382 IPR018108 -
Viun5g03617 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 90 183 IPR018108 -
Viun5g03617 393 SUPERFAMILY Mitochondrial carrier 89 378 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03617 Viun-Chr5 45546387 45549994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03617 2 393 Antiporters AT5G13490 74.745 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03617 K05863 - gmx:100800843 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03617 5 45546387 45549994 Viun5g03617 5 45546387 45549994 ECH