Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03602 ATGGAGTACTCTATGGAATCTCTGGGAAGAGATCTTAAGAACGTGAGGAACTACTTCAGGAGTGGAAAAACAAAGGAATCATCATGGAGAGAATCACAGCTCAAAGGGTTGCAAAGTTTTCTAGTTGAAAGAGAGGAAGAAATTTTGAAGGCCCTGAAGCATGATTTGGGGAAGCATTACGTTGAGGCCTTCAGAGATGAGGTAGGAACGTTGATGAAGACCTTAAACTTGGCCACAAAGAATTTGAAAAAATGGATGGCGGGGGAAGAGGCTAAATTGCCAAAAATAGCACTGCTTTCGAGTGCTGAGATAGTTCCTGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAACTTCCCTTTTGGACTGTCTTTGGAGCCTCTGATAGGAGCAGTAGCTGCTGGAAACACTGCGGTTTTGAAGCCTTCAGAGATTTCCCCTACTTGCTCTTCTCTTTTAGCCACTGTGCTTCCAACTTATTTGGACAACAATGCCATTAAAATCATCGAAGGTGGAGCAGAAGTAGGAGAATTACTCTTGCAGCAAAGATGGGACAAGATTTTCTTCACAGGAAGTGCAAGAGTGGGAAGGATTGTTATGTCTGCTGCAGCTGTTCATCTTACTCCAGTGACTTTGGAGTTGGGTGGAAAATGTCCAGCACTGGTTGATTCTCTTACTTCTTCTTGGGACAGAGAGGTGGCTGTGAAACGAGTTTTGGTTGCAAAATTCGGGGCTTGTGGAGGACAAGCATGCATAGCAATCGATTATGTACTTGTAGAGAAGAGTTTCAGTTCTATATTGGTGACATTGATGAAGGATTGGATTAAGAAAATGTTTGGAGAAAATCCTAAAGAGTCGAACAGTGTTGCAAGGATAGTTAATGAGAAACATTTCATGAGACTCAAAAATCTTCTCACTGATCCAAGGGTGAAAGAGTCGGTGGTTTTTGGAGGTTCAATGAACGAAAATGACTTATTTATTGAACCCACAATATTGTTGGATCCTCCACTTGATTCAGCAATCATGGCTGAGGAAATCTTTGGCCCGGTGCTTCCAATTATCACTCTGGAGAAGATTGAAGACAGTGTCGAGTTCATAAGCTCAAGGCCTAAACCATTAGCAATCTATGCCTTTACGAAAAACCAAACTCTGCAGAGAAGAATGGTATCTGAAACATCATCGGGAAGTCTTGTTTTCAACGATGCAATTCTACAGTACATAGCAGATACCCTGCCATTTGGAGGAGTTGGAGAATGTGGGTTTGGCAAGTACCATGGGAAATTCTCCTTTGACGCGTTCAGTCACCATAAGGCTGTGGCCAGAAGAAGTTACTTCACTGATTTTTGGTACAGATTTCCTCCATGGAATCTTAACAAGCTCCAACTACTTGAGGTCTCTTACAATTTGGATTATCTTGGAATACTTCTAGTTCTGCTTGGCTTAAAGAACTCAAAACGATCCTTGTTTTATGCTTCTAATTGA 1485 0.4189 MEYSMESLGRDLKNVRNYFRSGKTKESSWRESQLKGLQSFLVEREEEILKALKHDLGKHYVEAFRDEVGTLMKTLNLATKNLKKWMAGEEAKLPKIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTAVLKPSEISPTCSSLLATVLPTYLDNNAIKIIEGGAEVGELLLQQRWDKIFFTGSARVGRIVMSAAAVHLTPVTLELGGKCPALVDSLTSSWDREVAVKRVLVAKFGACGGQACIAIDYVLVEKSFSSILVTLMKDWIKKMFGENPKESNSVARIVNEKHFMRLKNLLTDPRVKESVVFGGSMNENDLFIEPTILLDPPLDSAIMAEEIFGPVLPIITLEKIEDSVEFISSRPKPLAIYAFTKNQTLQRRMVSETSSGSLVFNDAILQYIADTLPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSYFTDFWYRFPPWNLNKLQLLEVSYNLDYLGILLVLLGLKNSKRSLFYASN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03602 494 Pfam Aldehyde dehydrogenase family 22 440 IPR015590 GO:0016491
Viun5g03602 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Viun5g03602 494 FunFam Aldehyde dehydrogenase 217 420 - -
Viun5g03602 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Viun5g03602 494 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
Viun5g03602 494 PANTHER ALDEHYDE DEHYDROGENASE 4 475 IPR012394 GO:0006081
Viun5g03602 494 FunFam Aldehyde dehydrogenase 16 220 - -
Viun5g03602 494 PIRSF ALDH 2 476 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03602 Viun-Chr5 45465870 45475146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03602 1 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.416 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03602 K00128 - gmx:100798020 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03602 5 45465870 45475146 Viun5g03602 5 45465870 45475146 ECH
Viun5g03602 5 45465870 45475146 Viun11g02195 11 36822229 36825547 PCT