Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03586 ATGAGAGAACAAAGCTTTGGAGATAAGATGCATGGAATAACAGCAACTCTCTCTCTCACTGCAAACACTTTTCTTTGTTGTTCCCACAACACTCACCTTTCTCTCAGATCTCTTCAACCAAATTGTTGCATACCCACTTCTAAACTTAGCTATTCAAGTCGTTTTCACCATTTACAGTGGAAGCAGCAGAGAAAAGAAAGATGGGGCAATAGAATGATGGTGGTGAGAGCAAGGCGTGGCGAGTCGCCGTACGAAGTTTTGGGTGTGTCTCCATCCGCAACTGTCGGCGAAATCAAAAGGGCGTATCGGAAACTTGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGAAAAGGCACAGGAGAAATTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCCAGTTCCCGCAAAAGATATGATTCTGGAAGTCAAGGTTATGATTTTTCTCAAGGAAGCCAAAGTAGGAGTGCACAACCTGAAGAAGAATTTTATGGACTAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAATTGGGAAGCAAACGCTGCTTCAGAAGGAAAACCAAAGAGTCTGTGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTACAGATCAGAATGATGATTACGAGACACCTCAGGGAGAAAATGCATCCAAATTTTCTGGGAGAGAGACGCCAAGCGGTAGTAGTAGTCCAGGTGAAGCTAGCAAAGGCAACAGAAGTGTTGAGGATAACCTTGAGGAAATAGAAGCCACTCTGGCTCAGTTGAAAAAAGAATTAGGCTTGTAG 834 0.4197 MREQSFGDKMHGITATLSLTANTFLCCSHNTHLSLRSLQPNCCIPTSKLSYSSRFHHLQWKQQRKERWGNRMMVVRARRGESPYEVLGVSPSATVGEIKRAYRKLALKYHPDVNKEEKAQEKFMRIKHAYNTLLNSSSRKRYDSGSQGYDFSQGSQSRSAQPEEEFYGLEDFFKDLQEEFRNWEANAASEGKPKSLWEELAEIGEEFVEFLEKELNITDQNDDYETPQGENASKFSGRETPSGSSSPGEASKGNRSVEDNLEEIEATLAQLKKELGL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03586 277 Coils Coil 254 274 - -
Viun5g03586 277 Pfam DnaJ domain 83 143 IPR001623 -
Viun5g03586 277 CDD DnaJ 83 135 IPR001623 -
Viun5g03586 277 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 40 237 - -
Viun5g03586 277 SMART dnaj_3 81 138 IPR001623 -
Viun5g03586 277 MobiDBLite consensus disorder prediction 138 162 - -
Viun5g03586 277 MobiDBLite consensus disorder prediction 138 163 - -
Viun5g03586 277 ProSiteProfiles dnaJ domain profile. 82 146 IPR001623 -
Viun5g03586 277 Gene3D DnaJ domain 80 189 IPR036869 -
Viun5g03586 277 PRINTS DnaJ domain signature 102 117 IPR001623 -
Viun5g03586 277 PRINTS DnaJ domain signature 118 138 IPR001623 -
Viun5g03586 277 PRINTS DnaJ domain signature 84 102 IPR001623 -
Viun5g03586 277 FunFam Chaperone DnaJ-domain superfamily protein 79 189 - -
Viun5g03586 277 MobiDBLite consensus disorder prediction 221 253 - -
Viun5g03586 277 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Viun5g03586 277 MobiDBLite consensus disorder prediction 218 261 - -
Viun5g03586 277 SUPERFAMILY Chaperone J-domain 54 142 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03586 Viun-Chr5 45380654 45383968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03586 84 144 C2H2 Transcription Factor Family AT1G74250 40.299 4.64e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03586 - - gmx:100793601 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03586 5 45380654 45383968 Viun5g03586 5 45380654 45383968 ECH