Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03585 ATGAGAGAACAAAGCTTTGGAGATAAGATGCATGGAATAACAGCAACTCTCTCTCTCACTGCAAACACTTTTCTTTGTTGTTCCCACAACACTCACCTTTCTCTCAGATCTCTTCAACCAAATTGTTGCATACCCACTTCTAAACTTAGCTATTCAAGTCGTTTTCACCATTTACAGTGGAAGCAGCAGAGAAAAGAAAGATGGGGCAATAGAATGATGGTGGTGAGAGCAAGGCGTGGCGAGTCGCCGTACGAAGTTTTGGGTGTGTCTCCATCCGCAACTGTCGGCGAAATCAAAAGGGCGTATCGGAAACTTGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGAAAAGGCACAGGAGAAATTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCCAGTTCCCGCAAAAGATATGATTCTGGAAGTCAAGGTTATGATTTTTCTCAAGGAAGCCAAAGTAGGAGTGCACAACCTGAAGAAGAATTTTATGGACTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAATTGGGAAGCAAACGCTGCTTCAGAAGGAAAACCAAAGAGTCTGTGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTACAGATCAGAATGATGATTACGAGACACCTCAGGGAGAAAATGCATCCAAATTTTCTGGGAGAGAGACGCCAAGCGGTAGTAGTAGTCCAGGTGAAGCTAGCAAAGGCAACAGAAGTGTTGAGGATAACCTTGAGGAAATAGAAGCCACTCTGGCTCAGTTGAAAAAAGAATTAGGCTTGTAG 867 0.4141 MREQSFGDKMHGITATLSLTANTFLCCSHNTHLSLRSLQPNCCIPTSKLSYSSRFHHLQWKQQRKERWGNRMMVVRARRGESPYEVLGVSPSATVGEIKRAYRKLALKYHPDVNKEEKAQEKFMRIKHAYNTLLNSSSRKRYDSGSQGYDFSQGSQSRSAQPEEEFYGLGNFLRDVQITIEDFFKDLQEEFRNWEANAASEGKPKSLWEELAEIGEEFVEFLEKELNITDQNDDYETPQGENASKFSGRETPSGSSSPGEASKGNRSVEDNLEEIEATLAQLKKELGL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03585 288 MobiDBLite consensus disorder prediction 232 264 - -
Viun5g03585 288 Pfam DnaJ domain 83 143 IPR001623 -
Viun5g03585 288 CDD DnaJ 83 135 IPR001623 -
Viun5g03585 288 MobiDBLite consensus disorder prediction 229 272 - -
Viun5g03585 288 PRINTS DnaJ domain signature 118 138 IPR001623 -
Viun5g03585 288 PRINTS DnaJ domain signature 102 117 IPR001623 -
Viun5g03585 288 PRINTS DnaJ domain signature 84 102 IPR001623 -
Viun5g03585 288 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 40 248 - -
Viun5g03585 288 SMART dnaj_3 81 138 IPR001623 -
Viun5g03585 288 MobiDBLite consensus disorder prediction 138 162 - -
Viun5g03585 288 MobiDBLite consensus disorder prediction 138 163 - -
Viun5g03585 288 ProSiteProfiles dnaJ domain profile. 82 146 IPR001623 -
Viun5g03585 288 SUPERFAMILY Chaperone J-domain 82 170 IPR036869 -
Viun5g03585 288 Coils Coil 265 285 - -
Viun5g03585 288 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Viun5g03585 288 Gene3D DnaJ domain 80 199 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03585 Viun-Chr5 45380600 45383968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03585 84 144 C2H2 Transcription Factor Family AT1G74250 40.299 5.00e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03585 - - gmx:100812972 450.669