Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03569 ATGGATCCAAACACTGTCACGAGCGGCTACGAGTTTGATGAGTGGGATCTCAATGGACACTACACGAACCTCGTCACGGATCCTTTTTTCTATCAGTCCGATGTGGGCCAACCTGGGTTTTCTCCGAATACAATTTTAAACTCTGACCCGCTTGTTTCATCCTCGGCGGACTCCGCCGCTATGGCGGCTACGGTTGAGGAAGACACTGATTTTTCAGAAACCTTCAAGTTCATAAGTCAAATTCTCATGGAAGAGAACTTCGAACAGAAACCGTGCATGTGCTATGACCCTTTGACTCTGCAACACACTGAGAAATCATTCTATGATGCTTTGGAATTGGAACCGCCGCTGCCCCTTTCCCCTAATCAGCACCCGCTTGAGAGCCCCGATGGTAATTCTTCCAATTCCACTACTGATTCAGCAAATTCTCACGACTTGAAACCTTCTTCACCCAATACACCGGTTTCTGGTGGTGGTGAGGCTTTGCATTCCCCTACCCACGCGCCCTCTTTCTTTGTTCCGCCGTCTGCTTTGACTAAAATTAACGAGGGAACCGTGGATATGGATTCTTCTGTGAGCAAGCTCTTGGCTGAAAATATTTTCAGCGATGCAGAATCTATGTTGCAGTTTAGGAGAGGGTTGGAGGAGGCTAGTAAGTTTCTTCCTCAGAGACCTCAGCTTTTCACTGGGTTGGAGAGCGCCACGGTTTCTGCGGAACCAAAGGTAGGAGGGGAATTAACCGTGAAGAGTGAGAATTCAATTGGGGTGAAGAGTAGAAAGAATCACGCGCGCCAGGATGAAGAAGAAGGAAGAAGCAACAAACACTCTGAGGTTTGTGTTGATGAGGAGAATGAAATATCTGAAATATTTGATAAGGTATTGCTTAGTGTTGAAAATGTGCCACTGTATGCTGGTAAGAGTGCGTCTGTGGCAGTGGGAGATAGTAACACAAAGCTGAGTGAGCAACCTCCATCGGTTGATGTTGGGAAGGTTCGTTCCAAGAGGCAAGGGAAGAAGAAGGAAACAGTGGATTTGAGGACCCTTTTGGTTCTATGTGCGCAAGCTGCGTCTGCCAGTGACAACAGAACTGCTAATGAACTATTGAAGCAGATTAGGCAACATTCTTCTGCTTTGGGTGATGCCTCACAAAGGTTGGCTCATTACGTGGCCAATGCTTTGGAGGCTCGCTTGATCGGTGCCGGAACTGGAACACAGATATTTTATATGAGCTACAAGAACTTCACTACTACTGATTTCCTGAAAGCTTACCAAGTTTTCATATCTGCCTGTCCTTTCAAGAAATTTGCACATTTCTTCGCAAATAAAATGATTATGAAAACAGCAGAAAAGGCAGAAACTCTTCATATTATTGACTTTGGTATCTTGTATGGTTTCCAGTGGCCAATTCTCATCAAGTTTTTATCAAGTAGAACTGGAGGGCCTCCCAAGCTGCGCATCACAGGAATAGAGTATCCTCAACCAGGCTTTCGTCCATCTGAAAGAATCGAGGAGACTGGTCGTCGTCTAGCTAAGTATTGCAACCGATTCAATGTTCCCTTTGAGTACAAGGCCATACCATCAAGAAACTGGGAAACCATTAAAATTGAAGACCTTAAGATTGAGAGCAACGAGGTGCTTGCTGTGAACTGTCTGGTAAGGTTTAAGAATTTGCTTGATGAATCAATTGAAGTGAGCAGTCCCAAAAATGCAGTTCTGAATTTAATCAGGAAGATGAATCCGCATATTTTTGTTCACTCTGTGGTAAATGGATCTTACAATGCCCCTTTCTTTGTCACGCGCTTCCGGGAGGCACTGTTCCATTATTCTTCCATTTATGACATGTTTGACACTCTCGTTTCCCGTGAAAATGAATGGAGGTTGATGCTTGAGAGAGAATTTTTGGGTCGGGAGATCATGAATGTTGTAGCCTGTGAAGCTCTTGAAAGGGTTGAGAGGCCAGAGACATACAAACAATGGCAGGTTCGGAATACTAGAGCTGGTTTTAGGCAACTACCACTCGACAAGGAGTTAATGGCCAAATTTAGGGGCAAGTTAAGGGAATGGTACCACAAGGATTTTGTCTTTGATGAAGATGGCGGTTGGATGCTTCAAGGTTGGAAGGGTCGCATTTTGTATGCTTCCACTTGTTGGGTGCCAGCATAA 2163 0.4489 MDPNTVTSGYEFDEWDLNGHYTNLVTDPFFYQSDVGQPGFSPNTILNSDPLVSSSADSAAMAATVEEDTDFSETFKFISQILMEENFEQKPCMCYDPLTLQHTEKSFYDALELEPPLPLSPNQHPLESPDGNSSNSTTDSANSHDLKPSSPNTPVSGGGEALHSPTHAPSFFVPPSALTKINEGTVDMDSSVSKLLAENIFSDAESMLQFRRGLEEASKFLPQRPQLFTGLESATVSAEPKVGGELTVKSENSIGVKSRKNHARQDEEEGRSNKHSEVCVDEENEISEIFDKVLLSVENVPLYAGKSASVAVGDSNTKLSEQPPSVDVGKVRSKRQGKKKETVDLRTLLVLCAQAASASDNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLIGAGTGTQIFYMSYKNFTTTDFLKAYQVFISACPFKKFAHFFANKMIMKTAEKAETLHIIDFGILYGFQWPILIKFLSSRTGGPPKLRITGIEYPQPGFRPSERIEETGRRLAKYCNRFNVPFEYKAIPSRNWETIKIEDLKIESNEVLAVNCLVRFKNLLDESIEVSSPKNAVLNLIRKMNPHIFVHSVVNGSYNAPFFVTRFREALFHYSSIYDMFDTLVSRENEWRLMLEREFLGREIMNVVACEALERVERPETYKQWQVRNTRAGFRQLPLDKELMAKFRGKLREWYHKDFVFDEDGGWMLQGWKGRILYASTCWVPA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03569 720 MobiDBLite consensus disorder prediction 255 278 - -
Viun5g03569 720 Pfam GRAS domain family 345 717 IPR005202 -
Viun5g03569 720 MobiDBLite consensus disorder prediction 249 278 - -
Viun5g03569 720 MobiDBLite consensus disorder prediction 125 159 - -
Viun5g03569 720 MobiDBLite consensus disorder prediction 314 338 - -
Viun5g03569 720 ProSiteProfiles GRAS family profile. 336 718 IPR005202 -
Viun5g03569 720 MobiDBLite consensus disorder prediction 114 168 - -
Viun5g03569 720 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 273 713 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03569 Viun-Chr5 45303160 45306033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03569 74 720 GRAS Transcription Factor Family AT1G07530 49.928 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun5g03569 GRAS 2.9e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03569 - - aprc:113855970 1052.74