Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03548 ATGGGAAAGGACCTGATTTCTTCCGACCAGACCGCTATTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTAAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCCCACAAAAGGAGAAGACATGCCACATATAAGAAAAAAACCATTTTGTATAACCGACTTGAAGACCAACAAGATGGGGTTACGGAAGCAGAACCCCTTCTCGTCAAACAGCACAGCGAAAAATTGCATGCAGCTAGCAAAAGTTCTCCCAAATATAACCAAAAGGAAACACGAACTGGGAAAGAGTTTAACAAAGAAAACTTCAAAGGCAGAGATACCATGGACTACTCGAGGAAAAACCAGGCCAGTAGTGAGTATGAACTTCGTGTGGAAAAAGATGGCAAGACAACAGAAGGTTACCTTAATCATAGGCCTACGGAAACAAACAAGCATAATGGAGACATTTCCTATAAATTTGAGAAACATTCTGATGTTTTTGAGTTTCTTAGGGTGGAGAAGGATTTATTACTTAAATTTCTGCGAGACATGGACTTCAGTGGGAAAAAACTCCATCAACCTTCCCAAACCAACGCAAGATTGACAAAATGTGGCTCATTTCCTTTAGCCTCAACTTCACAGATGAGGAACATTAGCTCTAGGTCCTTAAAGCACAAGCAAAACGAAATTTATCCAAAGGGAGAAAAATTGTTTGCTGTTACGCAGGAATCAAACATGTCAAGGTCCAGTTTTGTGAAAGATGCTTCTTACGAGAAGCCACGAACTTTGGTGAGTGATATTGGTGTTGATAGTGCCGTGAAACAGAAAGCAATCATTTCTTCAAGGTCTTCTCAGGAATCAAATCACAGAGGGTGGAATCAGTTGGTTCTTCATCAATTTAAAGCTATAAAGCAGAAGATAAAACATGCTCTTGTGGAATTCAGAAAAAGTGGTAACCAAACTCCTGCTGAAGCTATCCAACGCAGAGCTTCACCTGAATATAGCATTATCAATAATGAGGAAGAGATCTCACAATCTTTAGAAGATGGCGTGGTTCAAGAATACAAAAGGAGCAAAAGCTCAAATGAAACTAAAGCTTCTGATTATGATGCCAACAAACATGATGCCCGGCTCATGCGGAGAACATCTTCTCTGAATGAATCATTGGATAGATATACTCAGTTGTTCGAGAAAAGCTTCAGCAAAGAAGCTAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACACACGAGGATCGGATCCACAAGAGTGCACATGTTCCTAAGTTTTCAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCATTGTACAAGAGGCACTTTTTGATGCAAATGATGTAGGGAATACCGAGGAAACTTATGATCGTGTTCATAGAAAATCAGTGAGTCTTCCTTTGAAGATGGACAAATCACTAGATAATTTTAAAGAGGTTGAGATTGTGGAAACAGATAAGGCTTTGGAGAAAATTGATGAAGTTACCTGTGACCAAAAGGAGGACATGGATGAGGCAGAAGTGGGGGATGAAAAAGAGGAAATGAGTAATATGACTGCCTATCTCAGCAGGGAGGTGATGGCAACTCTAGAAACTAGCTGCGAGGACAACATAACCAGCCACGAAGAAGGCACAGACTTGTACACCCAAGTCTCTACATTGGACGAATTGGAAGCTGATTTATCAGATAAAGGAAGTGTATGGCCACAGTCTTCATCCAACAGAAATGCAAGTGGAATAACAGCTGAAGATACAGATTACCCTTCCAATTTCAAATATGTAAAAAATGTTCTTGAATATTCGGGATTCTTGGGAAATGAGCACACTCAGATGCGATACACAATAGACCAGCCACTAAAGCCATCCTTGTTCAAAGATTTGGAAGCGAGTTTGCGCCATGAAATAGAACCCTCTGAAGAAGACACAACCAACCCTTATGATCACCAACTCATTTTTAACTTGGTGAACGAGGTGCTGCTCGAAATTTATGGAAGGTCACCAACTTACTTCCCAAGACCGTTCTCCTTCAACCCCCGCCTCCATGCAATGCCCAAAGGGCACTATCTTCTGCATGAAGTGTGGAATAGTGTTAATTCATACACGACCTTGAGACCTGAGCTAGATCAGACATTAGATGATGTTGTGGGTCGTGATTTGGCAAAAGGAAGAGGGTGGATGATCCTTCAAGAGGAAGAGGAGTATGTAGCACTTGAACTAGAAGAGATGATAATGGATGATCTGTTTGATGAGTTTATCTTCTCATGA 2292 0.4079 MGKDLISSDQTAIQIQDNNPGCMWGMLKILDYHRWRVKKVFPHKRRRHATYKKKTILYNRLEDQQDGVTEAEPLLVKQHSEKLHAASKSSPKYNQKETRTGKEFNKENFKGRDTMDYSRKNQASSEYELRVEKDGKTTEGYLNHRPTETNKHNGDISYKFEKHSDVFEFLRVEKDLLLKFLRDMDFSGKKLHQPSQTNARLTKCGSFPLASTSQMRNISSRSLKHKQNEIYPKGEKLFAVTQESNMSRSSFVKDASYEKPRTLVSDIGVDSAVKQKAIISSRSSQESNHRGWNQLVLHQFKAIKQKIKHALVEFRKSGNQTPAEAIQRRASPEYSIINNEEEISQSLEDGVVQEYKRSKSSNETKASDYDANKHDARLMRRTSSLNESLDRYTQLFEKSFSKEAKWQSSKSKSLKLTHEDRIHKSAHVPKFSRSNLSMPNLETLGFIVQEALFDANDVGNTEETYDRVHRKSVSLPLKMDKSLDNFKEVEIVETDKALEKIDEVTCDQKEDMDEAEVGDEKEEMSNMTAYLSREVMATLETSCEDNITSHEEGTDLYTQVSTLDELEADLSDKGSVWPQSSSNRNASGITAEDTDYPSNFKYVKNVLEYSGFLGNEHTQMRYTIDQPLKPSLFKDLEASLRHEIEPSEEDTTNPYDHQLIFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHAMPKGHYLLHEVWNSVNSYTTLRPELDQTLDDVVGRDLAKGRGWMILQEEEEYVALELEEMIMDDLFDEFIFS 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03548 763 PANTHER PROTEIN TRM32 1 763 IPR044257 -
Viun5g03548 763 MobiDBLite consensus disorder prediction 81 129 - -
Viun5g03548 763 MobiDBLite consensus disorder prediction 95 129 - -
Viun5g03548 763 Pfam Domain of unknown function (DUF4378) 600 759 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03548 Viun-Chr5 45193633 45197948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03548 165 753 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.228 2.38e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03548 - - vum:124834749 1386.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03548 5 45193633 45197948 Viun5g03548 5 45193633 45197948 ECH