Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03526 ATGATGGGAGTCTCGGGCGCCGATGACGACGTCGTTCAAATCCAGCATCCGAACAAGCCCGGCGACCCTTTCATCGTCACCGTCAATTGCCCCGACAAGACCGGCCTCGCCTGCGATATCTGCAGAGTCATTCTCGATTTCGGTCTCTGCATTTTCAAAGGAGATGTTTCAACCGATGGTGTTTGGTGTTACGTTGTGTTGTGGGTCATTCCACACTCCCTGTTGCTTCCCGTTAATTCCTCTTATCTGATCCTCAAAGAACGACTTCAGGGAATTTGTCCTCCTTGTTTAGCCTCCTTTTATCTCGTCCAGCAGCCTTCCAGATCTTCTCCTGTTTATCTGTTGAAGTTCTGTTGCCTTGATCGAAAGGGGTTGTTACACGAGGTAACAAAAGTGCTCTCGGAGCTTGAACTTACCATTCAAAAGGTGAAAGTGACCACAACACCGGATGGTAGAGTGTTGGACCTATTTTTCGTGACAGATAACAGGGAACTTTTACACACGAGAAAGCGACAAGATGAGACATGTGAAAGACTGAATGATGTTCTGCGAGACTCGTGTATCAGCTGTGAACTTCAATTGGCGGGTTCAGAGTATGAGTATAATCAGGGTATCTCTTCTCTATCTCCTGCTTTAGCTGAGGAGTTATTTCAATGTGAGTTATCAGAAAATGAAGTTCGTTCTCAAGCTCTTAGTCCTGATATGGCAAAGTTGAAGAAAACCATCGTAACACTAGACAATGCCTTAAGCCCAGCTCACACGCTTGTTCAAATACGATGTGCTGATCACAAGGGTCTTCTTTATGACATTATGAGAACATTCAAGGACATGAATATAAAGATTTCATATGGCCGATTTTCACCCAATTCAATGGGATATCGTGAGTTAGATATATTTATTCAGCAGAAAGAAGGAAAAAAGATTTTGGATCTGGAGAAGCAAAGTGCACTGTGCTGTCGTTTGAAACTGGAAATGCTTCATCCATTGCGAGTAATCATTGCCAACCGAGGACCAGATACCGAACTATTGGTCGCTAATCCAGTTGAGCTATCTGGAAAAGGAAGACCTCGAGTTTTTTATGATGTCACATTGGCTCTCAAAACACTTGGAATTTGTGTTTTCTCGGCTGAAGTAGGAAGGCATTCAACTTCAGAGCGTGAATGGGAGGTGTACAGATTTCTCTTGGATGAGAACTGTGAGCTACAATTAACAGGTGTTGCTGCTAGAAATAAGATTGTAAATAAGGTTAGAAGAACCTTAATGGGTTGGTAA 1272 0.4332 MMGVSGADDDVVQIQHPNKPGDPFIVTVNCPDKTGLACDICRVILDFGLCIFKGDVSTDGVWCYVVLWVIPHSLLLPVNSSYLILKERLQGICPPCLASFYLVQQPSRSSPVYLLKFCCLDRKGLLHEVTKVLSELELTIQKVKVTTTPDGRVLDLFFVTDNRELLHTRKRQDETCERLNDVLRDSCISCELQLAGSEYEYNQGISSLSPALAEELFQCELSENEVRSQALSPDMAKLKKTIVTLDNALSPAHTLVQIRCADHKGLLYDIMRTFKDMNIKISYGRFSPNSMGYRELDIFIQQKEGKKILDLEKQSALCCRLKLEMLHPLRVIIANRGPDTELLVANPVELSGKGRPRVFYDVTLALKTLGICVFSAEVGRHSTSEREWEVYRFLLDENCELQLTGVAARNKIVNKVRRTLMGW 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03526 423 ProSiteProfiles ACT domain profile. 114 197 IPR002912 -
Viun5g03526 423 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 12 394 IPR040217 -
Viun5g03526 423 SUPERFAMILY ACT-like 21 69 IPR045865 -
Viun5g03526 423 SUPERFAMILY ACT-like 111 182 IPR045865 -
Viun5g03526 423 Pfam ACT domain 114 171 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03526 Viun-Chr5 45074294 45077304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03526 109 214 MAP Kinase Kinase Kinase AT4G35780 31.532 4.57e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03526 - - gmx:100793459 781.941