Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03497 ATGCCGAAAATGGGACTCAAAAGCTTATTCCTCTTCAAAACATCACCGTCACCACCTTCCATAAAGCCCTTATCCCACTCGTTAATGGACGAAAACGTTGAAACTGCACGCAATATCATTTCCAAATGGGACCTTATTCCCGCTTCTCACCAAACCTCTTCTCTCAAACCTACAACCGTTCCTCTTTTCAGCAACACGCGCCAGGAAGCCAAACAGTACCTTAAGGCCGTTGCGAGTTTGCAGTCCACTATGCATCACCTCGTCGCACTCGATTCCTCATCCGACAGCCTCATTCAAGCCCAATTCCTGATGCAACTCGCCATGAAGAGGCTCCAAACCGAATTCTATCGGATTTTAGCCGAAAACAAGGACAATCTCGATCCTGAATCCGTCCTTTCCACCGATCTTCGGAGCAGCAGTGTCTCCGAGGACGAAGACAATTTTTCCGAGGACGAGTACCGCTTCGCCGGCGGCTCGGTATCCACCGTCGCCATGGCGGATTTGAAAGCCATTGCGGAGTGTATGGTTTCCGCGGGATACAGCAAAGAGTGCCTCAAGATTTACGTCATAATGCGAAAATCGATCGTGGATGAGGCGCTGTATCATTTAGGAGTGGAGAGGCTGAGTCTTTCTCAGGTTCAGAAGATGGAGTGGGGGGTTCTGGAGTCCAAGATTAAGCGCTGGGTGGGCTCCGTCGAGGTTGCCGTACGAACTCTCTTCCGCGGCGAGAAATCGCTCTGCGAGTACGTCTTCGGTTCGGCGGAGAGGAAGATCGCGGACTCGTGTTTTTCCGCGATTTGCAGAGATGCCGCGGCGACGCTGTTCGGATTTCCGGAAAACGTGGCGAAGTGCAAGAAAACGCCAGAGAAAATGTTCAGGATGCTGGACTTGTACAACGCGATCTCTGAAAACGGACAACAAATCGAGTCCATCTTCTCGTCCCAATCAACCTCCTCCATCATATTACAGGCGCGCGCTTCAAAGGCGAGGCTCGGCGAGGCCATTCGGACGATGTTAATCAACTTTGAATCCGCGATTCACAAGGAATCTTCGAAGATTCCCGTGCCTGGAGGTGAAATCCACCCGCTCACGCGCTACGTCATGAACTACATCGCGTTCCTAGCCGATTACAAGGACGCGCTATCCGAGATAGTTGCCGATTGGTCGGAGAATCCATTGCCGGAGTCTTATTACCGCAGTGGCGATCGCGGGGGAATGAATCGGTCGTCGGAGATAGCGGAACGGATCGCGTGGCTGATATTGGTGCTCCTCTGCAAAATCGAGGGCAAAGCGGAACTGTACAAGGAGGTTGCACTCTCCTACCTGTTTCTCGCGAACAACATACATTACGTCGTCGTAAAAGTGCGAACCACGAACCTAGGGTTAATCCTCGGCGAACATTGGTTCACGAAACACGAAGTGAGGGTGAAAGAGTACGTTTCTAAGTACGAGAGCGTTGGATGGAGCAAGGTTTTCATGACGCCCCCGGAAAATCCCACGGCGGAACAAGCGAGGGCGATTTTCGAGAGTTTCAAGTTCGAACTCCATGAAGCGCGCAGGGCACAATCCTCGTGGGTCGTACCCGACCCGAATCTGCGTGACGAAATAAAAGCATCGATAGCTGCTAAGTTAGAACCAATATACAAAGTGTTTTTTGAGAAATATCAGCTCGGGTCGGATCCCATTTTCGGGTGTTTGCCCGATGATTTGCAAAGAGATCTCTCAGATATTTTATCGGGTTGCGTTTCGTCGTTGCCAACTCCTTCTCCACCGCAACGCTTAAAACACCGGTGA 1794 0.5123 MPKMGLKSLFLFKTSPSPPSIKPLSHSLMDENVETARNIISKWDLIPASHQTSSLKPTTVPLFSNTRQEAKQYLKAVASLQSTMHHLVALDSSSDSLIQAQFLMQLAMKRLQTEFYRILAENKDNLDPESVLSTDLRSSSVSEDEDNFSEDEYRFAGGSVSTVAMADLKAIAECMVSAGYSKECLKIYVIMRKSIVDEALYHLGVERLSLSQVQKMEWGVLESKIKRWVGSVEVAVRTLFRGEKSLCEYVFGSAERKIADSCFSAICRDAAATLFGFPENVAKCKKTPEKMFRMLDLYNAISENGQQIESIFSSQSTSSIILQARASKARLGEAIRTMLINFESAIHKESSKIPVPGGEIHPLTRYVMNYIAFLADYKDALSEIVADWSENPLPESYYRSGDRGGMNRSSEIAERIAWLILVLLCKIEGKAELYKEVALSYLFLANNIHYVVVKVRTTNLGLILGEHWFTKHEVRVKEYVSKYESVGWSKVFMTPPENPTAEQARAIFESFKFELHEARRAQSSWVVPDPNLRDEIKASIAAKLEPIYKVFFEKYQLGSDPIFGCLPDDLQRDLSDILSGCVSSLPTPSPPQRLKHR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03497 597 SUPERFAMILY Cullin repeat-like 61 558 IPR016159 -
Viun5g03497 597 Gene3D Exocyst complex component Exo70 53 584 - -
Viun5g03497 597 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 571 IPR004140 GO:0000145|GO:0006887
Viun5g03497 597 Pfam Exo70 exocyst complex subunit 226 571 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03497 Viun-Chr5 44901830 44903938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03497 11 580 EXO70 exocyst subunit family AT5G59730 45.545 3.37e-166 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03497 K07195 - gmx:100801773 867.84