Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03452 ATGGAGCAGTTCATCGATAACTTGCCGCCGATGGATCTGATGCGATCCGAGAAGATGACCTTTGTTCAACTCATCATTCCGGTGGAATCCGCACACCGCGCCATCTCCTATTTAGGCGAACTCGGTCTTCTCCAATTCCGCGACTTAAATGCTGATAAAAGTCCCTTCCAGAGAACATTTGTTAATCAGGTAAAACGATGTGCAGAAATGTCAAGAAAACTAAGATTCTTCAAGGATCAAATCAGTAAAGCTGGCCTATTGTCTTCTTCTCGTACTGTATTGCAACCAGATATTGACTTGGAGGATTTGGAGATACAACTTGCTGAACATGAACATGAGCTGATTGAAATGAACTCTAATAGTGACAAACTCCGGCAATCATATAATGAACTCTTGGAATTCAAGATTGTATTACAAAAGGCATGTGGCTTTCTTGTTTCAAGTCATAACCTTGCACTTTCAGATGAAAGAGAACTACAAGAGAATGTATTTTCAAATGATGCCTATGTTGAGACAGCATCTTTGCTTGAACAGGAAATGAGACCTCAGTCATCAAATTCGACTGGTTTAAGATTTATCAGTGGGATAATATGTAGATCCAAGGTTCTTATGTTTGAAAGAATGTTGTTTCGTGCTACAAGAGGCAATATGCTATTCAACCAGGAACCAGCTGATGAACAAATCATGGATCCTGTTTCAACTGAGATGATTGAAAAAACAGTGTTCGTCGTGTTTTTCTCTGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTCGGTGCAAATTGTTATCCTGTTCCCGAAGATATTAGCAAGCAGAGGCAAATAACTAGAGAGGTTTCATCACGTCTTACAGACTTAGAGACAACTTTGGAAGCTGGGATTAGGCACCGGAACAAGGCTCTAGCTTCTGTTGCAGACCATCTAGGAAAATGGATGAGCATGGTAAGAAGAGAGAAGGCTGTGTACGATACACTGAACATGTTAAACTTCGACGTTACAAAAAAATGTCTTGTGGGAGAGGGCTGGTGCCCTCTGCTTGCAAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCCACTAGAGGCAGTGGAATCACCACCTACATACTTTCGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATACGGTGTTGCAAGATACCAGGAGGCGAATCCTGCAGTTTACACAACTATTATATTCCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTAGGAGCATTGGTTCTTATAGCGCGTGAAAACAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTGTTTGGTGGGCGCTATGTGCTTCTGCTAATGGCACTATTTTCAATCTATTGTGGCTTAATCTACAATGAATTCTTCTCTGTTCCTTTCCACATATTTGGTGCATCTGCATACAAATGCCGTGATAGTTCTTGCAGGGATGCACATACTATTGGCTTAGTCAAATACCAAGACCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTCCTGAATTCTTTGAAGATGAAGATGTCCATTCTGTTTGGTGTGGCACATATGAATTTAGGAATTATATTAAGTTATTTTAATGCACGGTTCTTTGGAAGCTCATTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACTGTCTATTTGGGTATCTTTCCCTTCTCATTGTTATTAAGTGGTGTACTGGGTCTCAAGCGGACCTTTATCATGTTATGATATACATGTTTTTAAGCCCCACGGACAATCTTGGCGAGAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATATTGAAGAAGCTTCATACTGAGAGATTTCAAGGTCGTAGTTATGGCTTACTGAACAGTTCTGAGGAGGATCTTGAGGCTGAACCTGATTCTGCCAGACAACATCATCATGAAGAATTCAATTTCAGTGAAGTCTTTGTTCACCAAATGATCCACGCCATTGAATTTGTTCTAGGTTCTGTTTCTAATACAGCATCATATCTTCGTCTTTGGGCATTAAGTTTGGCTCACTCTGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCTTGGGGAGTGCACTTAAAGCTCACAAGATTCTAG 2286 0.4099 MEQFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLLSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHNLALSDERELQENVFSNDAYVETASLLEQEMRPQSSNSTGLRFISGIICRSKVLMFERMLFRATRGNMLFNQEPADEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLETTLEAGIRHRNKALASVADHLGKWMSMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLLAKTQMQEALQRATFDSNSQVGIIFHPLEAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTIGLVKYQDPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNCLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRSYGLLNSSEEDLEAEPDSARQHHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGVHLKLTRF 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03452 761 PANTHER VACUOLAR PROTON ATPASES 13 754 IPR002490 GO:0033179|GO:0046961|GO:1902600
Viun5g03452 761 Coils Coil 100 127 - -
Viun5g03452 761 PIRSF ATP6V0A1 9 760 IPR026028 GO:0000220|GO:0046961
Viun5g03452 761 Pfam V-type ATPase 116kDa subunit family 37 751 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03452 Viun-Chr5 44578004 44588004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03452 1 760 Primary Pumps ATPases(2) AT2G28520 80.446 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03452 K02154 - gmx:100776037 1428.31