Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun5g03401 | ATGTTTACAATGCGATTGTTATGGGGGCTAAGGCTGCCTCTGCTAATGATACTGATTCATCTTTTATTTCCCAACAGAGCAACCTACAAATTCTACGCTGAGGCTTTGATCACTTTCAAGGAGGGTTTGGTTGGAGGTCCACCACAATTAAGATGCAGCATTGTGAAATATGCATGTCAAAAGCAATGGCCTTGTCTTCACTGCTATAAACTAAAAGATTCAGGTGGAGTAACAACAAAGATAGATGGGAATAATGACATTCCAACACTTACACCTCTTCCAGAAACTCAAGATAGAAAACCAGGTGGAAGAAGGAGTTCTGTCATAATTGGTGGCGTTATTGCTGCCATTGTTGTCGTTGTAGTTCTGGTGACTGTCTATATCTGCTTGATGCGTGTTAAAAAATCTCTGAGGCAAACATCTGAGGCTGCTTCTTCTATGCCATCTCCCACTGTTGAGATGGGAAGAGTCAACACACAGCATGTCATTGCTTTCTCTCCACAAAACACAAGGGAGTTAACACTTTTGGAACTGGAACAAGCTACACAAAATTTCAGTCATAATAATATCATTGGTGAAGGTGGATTTGGTGTTGTATACAAGGGCTTGCTTCAAGATGGTTCTATTGTGGCTATAAAAAGGTGTCTATTTGCTCTGACAAAAGATTTCGTCCTAAATGTGAAACAGATTGCTCATGTTCACCACATTCATCTTGTGAAACTCATAGGCTATTATGAAGATAGCCATCAACAATTACTTGTATATGAATATCTCCCTAACGGCAATGTAGGGAGTCACCTATATGATAGTGAAGGTTTACCTGTTGGAAGGTTAAACTTGTGGCGAAGGTTATCTATTGCTTTAGGCGCATCCAAAGGAATGGAACATCTTCATAGTTTGGTTCCTCCTTTGGTTCACACAAACTTTAGAACTAGCAATGTTCTGTTAGATGAAACTTACACTGCCAAGGTTTCTGATTATGGATTCTGCAAACTGCAAACACAAGTTGATCATGCAGGCTCGTCTTCAAATGTAGATTGTTTTCTTGACCCAGAGTTGAGCTTTCCACAAAACTACTCAGAGAAGAGTGATGTATACAGTTTCGGGGTGTTCTTACTAGAGTTGATTTGTGGCTGTGAAGCACGTAACAAAAACATGTTACACCCAGATGAAAATATAGCATTTCAGGCAAAAAATCGTGTTGACTTGGACAAATTTGTTGACATGACCTTGGGATACAGAGAAAAGCATGGTGCCAGACGAATTTTGATGTTGGCATTGCAGTGTGTGGATGCTACTTCTAGAAGACCATCAATGGCGCAAATTGTGCTACAGTTGGAGCAAATTCAAAGAGAAATTGCTCCCATGTATTCTCAATTCAACGATGAGATTGGTGCCGTGACTCTTGGGAGTGAGCTTTTTCAATAA | 1428 | 0.4013 | MFTMRLLWGLRLPLLMILIHLLFPNRATYKFYAEALITFKEGLVGGPPQLRCSIVKYACQKQWPCLHCYKLKDSGGVTTKIDGNNDIPTLTPLPETQDRKPGGRRSSVIIGGVIAAIVVVVVLVTVYICLMRVKKSLRQTSEAASSMPSPTVEMGRVNTQHVIAFSPQNTRELTLLELEQATQNFSHNNIIGEGGFGVVYKGLLQDGSIVAIKRCLFALTKDFVLNVKQIAHVHHIHLVKLIGYYEDSHQQLLVYEYLPNGNVGSHLYDSEGLPVGRLNLWRRLSIALGASKGMEHLHSLVPPLVHTNFRTSNVLLDETYTAKVSDYGFCKLQTQVDHAGSSSNVDCFLDPELSFPQNYSEKSDVYSFGVFLLELICGCEARNKNMLHPDENIAFQAKNRVDLDKFVDMTLGYREKHGARRILMLALQCVDATSRRPSMAQIVLQLEQIQREIAPMYSQFNDEIGAVTLGSELFQ | 475 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun5g03401 | 475 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 116 | 449 | IPR047117 | - | |
Viun5g03401 | 475 | Pfam | Protein tyrosine and serine/threonine kinase | 188 | 445 | IPR001245 | GO:0004672|GO:0006468 | |
Viun5g03401 | 475 | FunFam | receptor-like serine/threonine-protein kinase NCRK | 158 | 257 | - | - | |
Viun5g03401 | 475 | ProSiteProfiles | Protein kinase domain profile. | 185 | 457 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun5g03401 | 475 | Gene3D | Transferase(Phosphotransferase) domain 1 | 258 | 467 | - | - | |
Viun5g03401 | 475 | SUPERFAMILY | Protein kinase-like (PK-like) | 163 | 454 | IPR011009 | - | |
Viun5g03401 | 475 | ProSitePatterns | Protein kinases ATP-binding region signature. | 191 | 213 | IPR017441 | GO:0005524 | |
Viun5g03401 | 475 | Gene3D | Phosphorylase Kinase; domain 1 | 147 | 257 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun5g03401 | Viun-Chr5 | 44251216 | 44255349 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun5g03401 | 102 | 451 | Receptor kinase-like Gene Family | AT5G49780 | 36.088 | 3.46e-52 | 187 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXa | Viun5g03401 | PK_Tyr_Ser-Thr | 1.2e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun5g03401 | - | - | gmx:100815066 | 741.495 |