Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03383 ATGCTACTTCATACACACACAATGGAAAAGTTGGAATTGATGAAGCCTCAATTAAATGTTGCTGTGGCTCTAGTTATTAGCTTGCTCTGTATCCAGCATTCATTTTGTGATGAACCTTCTGATACTGGACCAAACAAGTGGAAATGTAGATGCTCTTCATTACAAGGGAACCAGATATACTCTCCTGCTAACTGTTCCAAGTCATGTGATTGTCATTCAGATGCTGAAGAGAGTGCTTCCACATGGACATGCTTATGTGATTCGAATGGGTTTCCTGAAGTGTCAGCAGATGGCCATAACCTTAACTGTTTTAATGCCTGCAATTGCACGTGGGGAACTGTGAGGATGCCACAAGGTTCAAAGAAGCAAATTTCGAGCAAGATTGTTGTGGTTATTCTATCAGTATGTGTTACATGCACAACTGTTGCATTTCTTGCCTCAGTTATATGTCAGGTCTGCCGAAGGGAGAGATGTTCTATTCAATCACCAATGATCTCATCAGATAAAGAAACAAGTTACAGTAGCACCACCAACTTATTCAGTCATAAGACTTCTTCGCCTGTTAGTAATATTACAGGATGCTTTCAGAAGTCCTCTTTGTTGTTTGGTAGCCAAAGACAAACCTTTTATGGAAACATTATTCAATTTTCATTTGCTGAACTGGAAAATGCCACCGAAAATTTTTCAACTTCCAATCTAACTGGACTAGGTGGAAGCAGTTATGTATACCGTGGTCGGCTGAAAGATGGCAGTAATGTGGCAGTCAAGAGACTAAAAGATCAAAGAGGGCCTGAGGCAGACTCTGAATTTTTCACAGAGATTGAACTATTGTCTAGACTTCATCATTGTCATCTGGTGCCATTAGTAGGATACTGCTCAGAACTAAAAGGAAAAAATGTTCAAAGGTTGCTAGTGTTTGAATACATGACTAATGGAAATTTGAGGGATCGCTTAGATGGAGTTTTTGGAAAGAAAATGGACTGGTCAACTCGAGTTAGAATTGCATTAGGAGCTGCAAGGGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCCAGAATTCTGCACAGAGATGTCAAATCAACAAACATTCTTCTGGACAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAGCTTGAGAGCTGATGATCACCCCAGTCGTTCAGATTCTCCAGCAAGAATGCAGGGAACATTTGGGTATTTTGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTCTTGAGTCTGATGTCTTCAGTTTTGGAGTGGTTCTTCTTGAGCTTATCAGTGGTCGGCAACCTATCCACAAATCTGCAGGCAAAGAACAAAGTCTTGTTATATGGGCAAGTCCTCGCTTAAAGGATAGCAGGCGAGTAATAACCGAGTTGGCCGATCCACAGTTGAAAGGAAACTTCCCAGAAGAAGAGCTGCATATAATGGCATACTTAGCTAAGGAGTGCTTGCTGTTGGATCCTGACACCCGGCCAAGTATGACTGAAGTTGTTCAAATTCTTTCCAGTATCTCCCCAGACAGATCTAGAAGGAGAAGAAACATTCCAGTCAGACTTTTTCAGGAACCGGAGGACTTGGAGAATCAAAGACAAACTCCAAGTATATTTCCAACTTGTAATTTGTTGCCGTTAGGTGTTGACCACAATCTTAATGATGGGAATGAAAATGAAGATGCAAATACAGTTTCAAGTGAGCATATGGAGAGTTTGATCCTCTTTAGTCCAAAGGGTGAAAGCTGGCATGCATCAGAGGAGGAGATGGTAGATTTAACTGAGCCTCGTTTCGAATCATTTTTCATGTCAAACCCCAATTTCCCTTGA 1839 0.4127 MLLHTHTMEKLELMKPQLNVAVALVISLLCIQHSFCDEPSDTGPNKWKCRCSSLQGNQIYSPANCSKSCDCHSDAEESASTWTCLCDSNGFPEVSADGHNLNCFNACNCTWGTVRMPQGSKKQISSKIVVVILSVCVTCTTVAFLASVICQVCRRERCSIQSPMISSDKETSYSSTTNLFSHKTSSPVSNITGCFQKSSLLFGSQRQTFYGNIIQFSFAELENATENFSTSNLTGLGGSSYVYRGRLKDGSNVAVKRLKDQRGPEADSEFFTEIELLSRLHHCHLVPLVGYCSELKGKNVQRLLVFEYMTNGNLRDRLDGVFGKKMDWSTRVRIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKSLRADDHPSRSDSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSAGKEQSLVIWASPRLKDSRRVITELADPQLKGNFPEEELHIMAYLAKECLLLDPDTRPSMTEVVQILSSISPDRSRRRRNIPVRLFQEPEDLENQRQTPSIFPTCNLLPLGVDHNLNDGNENEDANTVSSEHMESLILFSPKGESWHASEEEMVDLTEPRFESFFMSNPNFP 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03383 612 FunFam receptor-like serine/threonine-protein kinase NCRK 309 519 - -
Viun5g03383 612 Gene3D Transferase(Phosphotransferase) domain 1 309 525 - -
Viun5g03383 612 PANTHER OS01G0750732 PROTEIN 77 521 - -
Viun5g03383 612 ProSiteProfiles Protein kinase domain profile. 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03383 612 Pfam Protein kinase domain 232 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03383 612 SUPERFAMILY Protein kinase-like (PK-like) 208 507 IPR011009 -
Viun5g03383 612 CDD STKc_IRAK 235 510 - -
Viun5g03383 612 SMART serkin_6 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03383 612 FunFam receptor-like serine/threonine-protein kinase NCRK 202 308 - -
Viun5g03383 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Viun5g03383 612 Gene3D Phosphorylase Kinase; domain 1 200 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03383 Viun-Chr5 44048570 44052814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03383 14 608 Receptor kinase-like Gene Family AT2G28250 52.224 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Viun5g03383 Pkinase 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03383 - - gmx:100499641 1018.45