Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03360 ATGTGCAAGACAAAGATGGCCACCAACGCCGCAAGTCCCACCCCCACACCGCGATCACAACAACAACAACAACGCTCCACCCAAAGCCCAAGAACATCCTCCTCAAGGCCCACACTCAGGCCCAATCCTGGACCCACCAATTCTTTCTCAGACAGACCCTCCACTTCTTACGCCTCCACCGCCAGCGCTCCCTACAGCGGCTCCACCGGCTACCGTCTCTCCTCCGACACCTCCATTGCCAGCCGCACCTCCCTCACCTCTCTCCGCGACACGCTCCCAGAAAACCCTCACATCTACGACTTCTCCGAAATCTGCGCCGCCACCAACAACTTCCTCGCCAAGCGACACTCCTCCTCCACCCCCTGCTGGCGCTGCACTCTCCGCGGAGCAGACGTCATTGTCTTCCAGCGCAAGTTCATCCGCAAACTCCAGACCAATCAGCTCCAGCAACTGCTCTCCGTCGTCTGTCGCAGCCACCACGTCAGCATCATCAAACTCCTTGGCGCCTCCGTCTCCGGCGATCACATCTACCTCGTCTACGACTTCGTCAACGGCGCCAGCCTCTCCGATTGTCTCCGCAACAAGAACAACCCGCGCTTCACCGTTCTCTCCACGTGGATGTCGCGAATGCAGGTCGCCACGGATCTCGCTCACGCACTCGATTACATTCACAACAAAACCGGTTTGAACATCAATTTCGTCCACAACCGTATCAAATCCAGCGGCATCATCGTCACGGAACCTTCTTTCAACGCTAGGGTTTGCCATTTCGGCACCGCGCAGCTCTGCGGCGAAATCGACCTCGAAAACGAACAATTAGGCGAAATCAGTGAGATAGGGGAGAAATTTCCGCCGTCCCCGGCGAGATCCAGGCAATTCGAGGGCGTGCGGGGGTACATGGCGCCGGAATTTCAAGGCTCCGGTGTTGCGTCTCAGAAGTGTGATATATACGCTTTCGGAGTGGTGATGTTGGAGCTCCTGTCCGGGGAGGAGCCATTGAAGTTTAAATATGACGAGAAGACGCGCGAATTTTTGAGGACGTCGGTGATCGAGACGGCGAAGGGCGTGATTGACGGCGGCGATGGTAGCGTGCAGGTGCAGGGGAAGCTGAGGAAGTGGGTTGATCAGAGATTGAAAGATTCGTTTCCTGTGGACGTAGCGGAGAAGCTTACACGTGTGGCACTGGAGTGTGTACACGTGGATCCAGATAAGCGGCCGAACATGGGACACGTGGCTGGGAAGATCTCGAAGTTTTATTTGAAGTCGAGGATGTGGTCGGACAGTATTAAGATGCCTGATATCACTGTTTCTTTGGGTCCTCGTTGA 1326 0.5596 MCKTKMATNAASPTPTPRSQQQQQRSTQSPRTSSSRPTLRPNPGPTNSFSDRPSTSYASTASAPYSGSTGYRLSSDTSIASRTSLTSLRDTLPENPHIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFIRKLQTNQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVNGASLSDCLRNKNNPRFTVLSTWMSRMQVATDLAHALDYIHNKTGLNINFVHNRIKSSGIIVTEPSFNARVCHFGTAQLCGEIDLENEQLGEISEIGEKFPPSPARSRQFEGVRGYMAPEFQGSGVASQKCDIYAFGVVMLELLSGEEPLKFKYDEKTREFLRTSVIETAKGVIDGGDGSVQVQGKLRKWVDQRLKDSFPVDVAEKLTRVALECVHVDPDKRPNMGHVAGKISKFYLKSRMWSDSIKMPDITVSLGPR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03360 441 PANTHER OS09G0572100 PROTEIN 1 441 - -
Viun5g03360 441 MobiDBLite consensus disorder prediction 1 74 - -
Viun5g03360 441 ProSiteProfiles Protein kinase domain profile. 98 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03360 441 Gene3D Phosphorylase Kinase; domain 1 73 182 - -
Viun5g03360 441 Pfam Protein kinase domain 141 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03360 441 SUPERFAMILY Protein kinase-like (PK-like) 98 411 IPR011009 -
Viun5g03360 441 Gene3D Transferase(Phosphotransferase) domain 1 184 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03360 Viun-Chr5 43935890 43937740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03360 94 429 Receptor kinase-like Gene Family AT1G51940 30.973 7.85e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Viun5g03360 Pkinase 8.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03360 - - gmx:100792694 692.575