Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03359 ATGGGCTCAGTGAGTAACATGAGTGTAGTAGAGAGGGAATATGACTCTTTTTCAGCTAATGAAGGTCCTTCAATGGTGAAAAACAAGAGACGTTCTTCCAGAGGCATGAACAGGGACCGCCACATCAAGGTGAACGGGAGAGACCGTCGAGTTCGCCTATCAGCAACCTGTGCTGCTCGTATCTTCCAACTCACCACTGAGCTAGGCAAGAAAACCGACGGTGAGACCATCGAATGGCTCTTGCACAAGGCTGAGCCCGCCATTGTGGCCGCCACCGGCACCGGCATTCTGCCTTCCATCGCCACCTCGGTGGACGGTGCCGCCACCTTCATGGCCAACACCACCGCCACCTTTGTCCCACTAGACACAATTTCTGCTCAGGATTCCAACTCAGTCACCGTTGGTGCGGTTGGAAGGACAGAACAGCCCATTCCCCCTTTCCATTTCGACTTTGAGTGGATGCAACACTCCGATTTAGGATTTCGTGACGATTAA 495 0.5293 MGSVSNMSVVEREYDSFSANEGPSMVKNKRRSSRGMNRDRHIKVNGRDRRVRLSATCAARIFQLTTELGKKTDGETIEWLLHKAEPAIVAATGTGILPSIATSVDGAATFMANTTATFVPLDTISAQDSNSVTVGAVGRTEQPIPPFHFDFEWMQHSDLGFRDD 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03359 164 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Viun5g03359 164 MobiDBLite consensus disorder prediction 19 40 - -
Viun5g03359 164 Pfam TCP family transcription factor 37 102 IPR017887 -
Viun5g03359 164 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 126 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03359 Viun-Chr5 43930861 43931355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03359 34 116 TCP Transcription Factor Family AT2G45680 63.855 1.03e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Viun5g03359 TCP 4.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03359 - - pvu:PHAVU_005G132500g 267.7