Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03301 ATGGCGTTATCTTGGCCACACGTGCTGCAGTTTCGTTCCCAACCTTTTCTCGGACATGCTAACTTCGTCTTCTTCTCCGATCTCACCGAATCTCGCTCTGTGGAACTGCCGTGCACTGGTTCCCTCACTCTGCTTCGTCGGTGCAAGATCTCCGGCCAGTCTCCGGCGGCGCTGAAACCGGTGAAATGTCTCAGCAGATCCACGGAGGAGAAGCAGAGCGACGCCGAAACCGCTCTGTCCGACTCCGAGGAAGTTGTCGATGAACCAGATGACCGGAACCGAACTTCCGTTCCGGCAAACGGTCGTGTTGGTTCGCAGAGGATTGCCACCGCGTTTTCAGGCGATTCTCTTTCTCTCGGAGTTCGAGAACCGGTTTATGAAGTCGTTGAAGTGAAGTCTAATGGGAAAGTGTCAACTAGAAAAATCAACAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACAAATTCAATGCCTGCTTTGCTGGTCCGGGAATATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACAATAATCGCATAGGGGGGAAAGCTTTTCTAGAGACATTGCTGCCTCGATTGAACCCCAAGAACAGCAATGGAGGACCATCGATGCCATTTGAAATTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGATTGGAGCAGAGATTGATGGACTTAGAACCTCGTGTACAAGCCCTTCTTGAGGCCTTGCCAAATAGGTTAACTGGTGACATATTGGAGCAGCTTCGTACTAGCAAACAAACTTTGGTTGAGTTAGGTTCCAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTCTGGAGGATCCTCATGAAATACGCCGTATATGCATCATGGGAAGAAACTGCACACTTAATAAAGGAAACAATAATATGGAATGCTCAGTGCCTTTTGAAAAGCAGAATGCTGAGGAGGAGGAGGAGGAAATTGAAATGCTTTTGGAAAATTATCTTCAAAGATGTGAATCCTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAATTTGAGTTCACGAAGACTTGAGGTTAGCAGAGTAGAACTCCTTCTGCAGGTTGGAACATTCTGCGTGGCAGTTGGTGCCCTTGTAGCAGGTATATTCGGCATGAACCTGAAGTCCTATCTTGAGGAGCATGTGTTGGCATTTTGGCTGACAACAGCGGGGATAATTGTTGGTGGAATTATTGCTTTCTTTCTGATGTATTCCTACCTCAGAGCGAGAAAAATATTTTGA 1368 0.4635 MALSWPHVLQFRSQPFLGHANFVFFSDLTESRSVELPCTGSLTLLRRCKISGQSPAALKPVKCLSRSTEEKQSDAETALSDSEEVVDEPDDRNRTSVPANGRVGSQRIATAFSGDSLSLGVREPVYEVVEVKSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNRIGGKAFLETLLPRLNPKNSNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLEALPNRLTGDILEQLRTSKQTLVELGSKAGALRQMLLDLLEDPHEIRRICIMGRNCTLNKGNNNMECSVPFEKQNAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIVGGIIAFFLMYSYLRARKIF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03301 455 Gene3D Magnesium transport protein CorA, transmembrane region 204 386 - -
Viun5g03301 455 Gene3D - 121 202 - -
Viun5g03301 455 FunFam Magnesium transporter MRS2-11, chloroplastic 204 386 - -
Viun5g03301 455 Coils Coil 244 264 - -
Viun5g03301 455 CDD Mrs2_Mfm1p-like 128 454 IPR039204 -
Viun5g03301 455 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 84 454 IPR039204 -
Viun5g03301 455 Pfam CorA-like Mg2+ transporter protein 335 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun5g03301 455 MobiDBLite consensus disorder prediction 64 78 - -
Viun5g03301 455 MobiDBLite consensus disorder prediction 64 100 - -
Viun5g03301 455 FunFam Magnesium transporter MRS2-11, chloroplastic 121 202 - -
Viun5g03301 455 Coils Coil 331 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03301 Viun-Chr5 43484655 43492693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03301 119 455 MRS2 Gene Family AT5G22830 83.383 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03301 K16075 - gmx:100808371 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03301 5 43484655 43492693 Viun5g03301 5 43484655 43492693 ECH