Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03257 ATGAGATTGGAAAAATGCTGGTTTTGCTCTTCAACCGTATATCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCAAAGATTTTTCGGTTTTGTAGGTCAAAATGCCACAAAAACTTCAAAATGAAGAGAAATCCCCGCAAGGTAAAATGGACCAAGGCATATCGTAGAGTGCATGGAAAGGATATGACACAGGATTCGACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAAAGATATGACAGGAATGTTGCGGAGAACGTCCTGAAGGCTATTCCAAAGATTGATAAGATCAGAGTCACCAGGGAGGAAAGACACCATAAGAATAGGATGAAAGGCAAAAAGGAAAAGCTCATGAAGGAGGCAGTGAGAGAGTTGGAACAGGGCATCAGTTTGGTGAAAGCTCCTTCAGTGCTTCAACAGGATCCTTCTCTCACTTTACCAAAGATCAAGGTAAAGGTTTCTCAACAGCAATCAGAGGAGAATCATGCCGCCATGGAAGAGTAG 510 0.4275 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNVAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLMKEAVRELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAAMEE 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03257 169 Coils Coil 109 129 - -
Viun5g03257 169 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Viun5g03257 169 SMART 4TRASH 6 44 IPR011017 -
Viun5g03257 169 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Viun5g03257 169 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Viun5g03257 169 PANTHER 60S RIBOSOMAL PROTEIN L24 1 163 IPR000988 -
Viun5g03257 169 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Viun5g03257 169 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Viun5g03257 169 Pfam Ribosomal protein L24e 1 65 IPR000988 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03257 1 169 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 68.047 2.85e-81 236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03257 5 43249685 43251313 Viun5g03257 5 43249685 43251313 ECH