Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03219 ATGAACATGGATGAATTCATAGCCAGCATTTGGAACACCGATGAAATCCAAGTGAACCCTCCTCTACCCTACGATGAAGCTGAAAAGAACAAAGGCGTTGCACCGGAACCCACCATTCCTCAGCCAAACTCAGCCTCAGCCTCAACCTCTGTCCCTCCCCCAAATTGCAAGAAAACTTCGGAAGAAGTTTGGTCTCAGATCCAGAAAAGCCAACCACAAAACACTGAACCTGAAAACAACAACAACACCACTCTTGCTAGGAATGAAACCCTCCAAAATGAATCCACATTTGGAGAAATGACTTTGGAGGATTTCCTGGTAAAAGCTGGGGTTGTTACTGAATCAACACTGTTCACTACTATATTACCTCAGAATCATTTCCCTACCATCCCAACTCATGTGCCATTTAACACAAGCTATATATTAATAGGCACTACTGGATCTAATGTCAATGTGCCCTGTGCTAGATTTGAACCACCTCAAATGCTGCCACAGAATAACCACTTTGTTATGAGGAATCTCCCTCCTGCAAATGTTGCTGTGGAGAATCCTCAAAACATAGCTGAATCAAGTAGCAACAAGGGTAAGAAGAGGATCATGTCTGGTCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGCTGAAGAATCGAGAATCTGCAGCACGATCTCGTGCAAGAAGACAGGCATATACTGTGGAGCTTGAAGCAGAGCTGGGAAATCTCAAAACCGAGAATGAGAGTCTGAAAAATATTCTGGCTGAAGATGAAGAGAAGAGAAAGAAAATATTAACTGAGTTCATGAAGACACCACCCTCAACAATGGCTCAAAAGAGGAATGAAAAACTGAAGAAACTGAAGAGGCCTCTGAGTGCATCCTGGTGA 888 0.4369 MNMDEFIASIWNTDEIQVNPPLPYDEAEKNKGVAPEPTIPQPNSASASTSVPPPNCKKTSEEVWSQIQKSQPQNTEPENNNNTTLARNETLQNESTFGEMTLEDFLVKAGVVTESTLFTTILPQNHFPTIPTHVPFNTSYILIGTTGSNVNVPCARFEPPQMLPQNNHFVMRNLPPANVAVENPQNIAESSSNKGKKRIMSGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELGNLKTENESLKNILAEDEEKRKKILTEFMKTPPSTMAQKRNEKLKKLKRPLSASW 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03219 295 MobiDBLite consensus disorder prediction 37 84 - -
Viun5g03219 295 MobiDBLite consensus disorder prediction 271 295 - -
Viun5g03219 295 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 208 271 IPR004827 GO:0003700|GO:0006355
Viun5g03219 295 Gene3D - 208 264 - -
Viun5g03219 295 MobiDBLite consensus disorder prediction 12 84 - -
Viun5g03219 295 Coils Coil 233 267 - -
Viun5g03219 295 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 275 IPR043452 GO:0003700|GO:0045893
Viun5g03219 295 Pfam bZIP transcription factor 210 267 IPR004827 GO:0003700|GO:0006355
Viun5g03219 295 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 213 228 IPR004827 GO:0003700|GO:0006355
Viun5g03219 295 SMART brlzneu 206 270 IPR004827 GO:0003700|GO:0006355
Viun5g03219 295 SUPERFAMILY Leucine zipper domain 210 259 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03219 Viun-Chr5 42967167 42969528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03219 1 295 bZIP Transcription Factor Family AT3G44460 39.032 8.25e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun5g03219 bZIP_1 2.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03219 K14432 - gmx:100799576 265.003