Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03218 ATGAACATGGATGAATTCATAGCCAGCATTTGGAACACCGATGAAATCCAAGTGAACCCTCCTCTACCCTACGATGAAGCTGAAAAGAACAAAGGCGTTGCACCGGAACCCACCATTCCTCAGCCAAACTCAGCCTCAGCCTCAACCTCTGTCCCTCCCCCAAATTGCAAGAAAACTTCGGAAGAAGTTTGGTCTCAGATCCAGAAAAGCCAACCACAAAACACTGAACCTGAAAACAACAACAACACCACTCTTGCTAGGAATGAAACCCTCCAAAATGAATCCACATTTGGAGAAATGACTTTGGAGGATTTCCTGGTAAAAGCTGGGGTTGTTACTGAATCAACACTGTTCACTACTATATTACCTCAGAATCATTTCCCTACCATCCCAACTCATGTGCCATTTAACACAAGCTATATATTAATAGGCACTACTGGATCTAATGTCAATGTGCCCTGTGCTAGATTTGAACCACCTCAAATGCTGCCACAGAATAACCACTTTGTTATGAGGAATCTCCCTCCTGCAAATGTTGCTGTGGAGAATCCTCAAAACATAGCTGAATCAAGTAGCAACAAGGGTAAGAAGAGGATCATGTCTGGTCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGCTGAAGAATCGAGAATCTGCAGCACGATCTCGTGCAAGAAGACAGGCATATACTGTGGAGCTTGAAGCAGAGCTGGGAAATCTCAAAACCGAGAATGAGAGTCTGAAAAATATTCTGGTAGACAATATTGAAATTGAGGGTTCTTATTATTTTTTTTTTCTTTCTAAATGTTTTTTGGTGTTTAACATATTTTATATTCTTTTACATCTGCAACAGGCTGAAGATGAAGAGAAGAGAAAGAAAATATTAACTGAGTTCATGAAGACACCACCCTCAACAATGGCTCAAAAGAGGAATGAAAAACTGAAGAAACTGAAGAGGCCTCTGAGTGCATCCTGGTGA 987 0.4164 MNMDEFIASIWNTDEIQVNPPLPYDEAEKNKGVAPEPTIPQPNSASASTSVPPPNCKKTSEEVWSQIQKSQPQNTEPENNNNTTLARNETLQNESTFGEMTLEDFLVKAGVVTESTLFTTILPQNHFPTIPTHVPFNTSYILIGTTGSNVNVPCARFEPPQMLPQNNHFVMRNLPPANVAVENPQNIAESSSNKGKKRIMSGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELGNLKTENESLKNILVDNIEIEGSYYFFFLSKCFLVFNIFYILLHLQQAEDEEKRKKILTEFMKTPPSTMAQKRNEKLKKLKRPLSASW 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03218 328 MobiDBLite consensus disorder prediction 37 84 - -
Viun5g03218 328 Gene3D - 208 257 - -
Viun5g03218 328 MobiDBLite consensus disorder prediction 14 84 - -
Viun5g03218 328 Pfam bZIP transcription factor 210 254 IPR004827 GO:0003700|GO:0006355
Viun5g03218 328 SUPERFAMILY Leucine zipper domain 210 252 IPR046347 GO:0003700|GO:0006355
Viun5g03218 328 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 208 252 IPR004827 GO:0003700|GO:0006355
Viun5g03218 328 MobiDBLite consensus disorder prediction 304 328 - -
Viun5g03218 328 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 289 IPR043452 GO:0003700|GO:0045893
Viun5g03218 328 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 213 228 IPR004827 GO:0003700|GO:0006355
Viun5g03218 328 FunFam BZIP transcription factor 208 258 - -
Viun5g03218 328 Coils Coil 233 253 - -
Viun5g03218 328 SMART brlzneu 206 271 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03218 Viun-Chr5 42967167 42969530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03218 1 328 bZIP Transcription Factor Family AT3G44460 35.135 8.19e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun5g03218 bZIP_1 4.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03218 K14432 - gmx:100799576 248.054