Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03161 ATGGGGTTTTTGTTGAAAGAAGCTTTGAGGACTCTCTGCGGTCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCCACAATTCTAAGTTATTAATCTGGGAAGAATGCTACTATGAACCTTTGCCATGCCCTCCACCCATGTTTGGAATGGGAGATTTGCCTTATCAGAATGGGGGAGGACACTGGTTTTCTTCAGGTTCTCAATCATCTCAACTCGGGATTCAAGAGGAGGACCGAGTCAATTCTTTGATTAACAAAATGACAGTAAACAATTCAGTTATCATTGCAGGAGAAGGTATGGTTGGACGGGCTGCATTTACAGGCAGCCATCAGTGGATTCTCTTGAACAGTTTCACAAAAGATGTATATCCACAGCAGTTATACCCTGAAGTGCATCACCAACTTTCAGCTGGAATACAGACAGTAGTAGTTATTCCTGTACTTCCTCACGGTGTTTGTCAATTTGGTTCTTTCTTACCTATGAATGAGAATATGGGATTTGTGAATGATGTGAAGAGCTTGATCTTGCAATTAGGATGTGTTCCTGGCGCCCTTCTATCTGAAGACTATTCAGCAAATCGATTTGCTGGACCTTCCATTGTGCCGGTGTCTATTGATCCACCTGTCATTACGTCGAATTGCACTCCCTCAGTAGCTAATGGCTCCAATCAGAAAAGTAATTCATTTCATACTTCAAGGCCTTTTGTTCAAACACCTTGCCATTTAAATGTAGAGACAAGTACCTGCCAGGGTTCTGCACTGGCACCAGAAACCTGTAAAATGAACCAGATACCCAGCAACCATTGCCAACCAAATGTTATTCCAATGAGTAAAACAAACTTTTCTGGGCAACAACAGAACAGAGCTATGGAGGCTGAAGTGATAATCTCAGATGTTGATTCATGCCTGCAGCAGCATTCTGTTTCACATACTGCTAGATCTGCATTTGATAACTTGACTGGTTCTGGGTCTTTTGGTCAATCTTGTTTGAGTGATGATCATCTAACATTAATGGAGCAACAAATCATATCAGCGATTGGGAATCGAGATAATGTTAATCCTTGTTTCAATGTGTCAAGCACCTTAAACATGCCACATCTAAACACAGATGGAGGCCACATACTTGGCCACAGTATGAATTCTAGCAGTGCCCCTTTACTTGGAGGAATCCCAATACATGGTGGAATGAGTACTCTTTTGAGGTCAAATCTGATTACTAGTCCTGGTTCAAAATCTCCCAAAGCATCCACAGCTGATTTATCCAGAGAAGTTGAGATTGGTCTTCAAAATTCTGATTCTTCAACTAAAGCAAGAGGTTGTTCTTTGGCTAATTCGAGTAATCAATGCAGCACCTTTCCCATGCACGTAGAAGGTTCTGATCACAAGTGTGTTTCAACTAATCAAAAGATAGATTATGATTTGCATCAGGCCCCTAACCTCCCCACTTTCCATGTTGAGCAACGTGTGCCCATTAGTGGTCAAATCCCTGGTCTTGCCCATGATTGCGTTAGTAAAGATGATAGTATTCAATCTATGATGGGAATGAATCCCAAACTCAAACTAGATTGTACTAAACCTCCATCAGATGATGACCTGTTTGATGTTTTAGGGGTAGATTTGAAAAACAAATTGCTGAATGGAAATTGGAATAAACTCTTTGCAGACGAATTGGATGCAAATACAGAAAATATGGACAAAAAGTCAGAACCTATGAACATACCAGACAGTGGCATATTTTCTGGGACGGGAACAGACCACCTCTTGGATGCAGTGGTCTCCAAAGCCAAATCTGTCGTAAAACAAGATTCTGACGACATGTCTTGCAGGACAACATTGACAAGGAACAGTACTTCCTCTGTTCCCTCTCCTTCCTGTAGACCGGTTATGTCTGGTAATTTCCAAGGGGGTTTATTTGATTTCCCTAAGAATGGTGGTAAAACAGGTGCCACAGAAGCTACCTTTCTTAGGTCCAGATGTAACAAGGAAGATGCCGGAAACTGTTCTCAAACTAGTTCTACTTATGGCTCACAACTTAGTTCATGGGTTGAGAACAGTGGGAGTGTTAAACGTGAGAATAGTGTTTCTACTGGATACTCAAAGCGGCCAGATGAAGCTTGCAAACCCAATCGTAAGAGGCTTAAACCAGGAGAGAATCCCAGACCTCGCCCCAAAGATCGCCAAATGATTCAAGATCGGGTGAAAGAACTAAGAGAAATTGTGCCAAACGGAGCAAAATGTAGCATTGATGCACTTTTGGAACGGACCATCAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCCGACAAGCTAAAACAAACCGGCGAGTCTAAGATTATTAATAAGGAAGGTGGGTTGCTTTTGAAAGACAACTTTGAGGGAGGAGCTACATGGGCATATGAAGTTGGCTCACAATCCATGGTTTGTCCTATTGTTGTTGAGGATCTGAACCCTCCTCGCCAAATGCTAGTGGAGATGCTTTGTGAGGAAAGAGGTTTCTTTTTGGAAATAGCCGACTTAATCAGAGGATTAGGTTTAACAATATTGAAAGGGGTAATGGAAGCTCACAATGACAAAATCTGGGCACGCTTTGCTGTTGAGGCCAACAGGGATGTAACAAGGATGGAAATATTCATGTCACTGGTTCGTCTTTTGGAGCAAACGGTGAAGGGAAAAGAATCTTCATCCAATGCAATGGATAATAACATGGTGTATCACAGTTTTCCACAGGCTGCGCAGATAGCAGCAACTGGAGGGCCTAGTAGCTTGCAATGA 2787 0.4223 MGFLLKEALRTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPCPPPMFGMGDLPYQNGGGHWFSSGSQSSQLGIQEEDRVNSLINKMTVNNSVIIAGEGMVGRAAFTGSHQWILLNSFTKDVYPQQLYPEVHHQLSAGIQTVVVIPVLPHGVCQFGSFLPMNENMGFVNDVKSLILQLGCVPGALLSEDYSANRFAGPSIVPVSIDPPVITSNCTPSVANGSNQKSNSFHTSRPFVQTPCHLNVETSTCQGSALAPETCKMNQIPSNHCQPNVIPMSKTNFSGQQQNRAMEAEVIISDVDSCLQQHSVSHTARSAFDNLTGSGSFGQSCLSDDHLTLMEQQIISAIGNRDNVNPCFNVSSTLNMPHLNTDGGHILGHSMNSSSAPLLGGIPIHGGMSTLLRSNLITSPGSKSPKASTADLSREVEIGLQNSDSSTKARGCSLANSSNQCSTFPMHVEGSDHKCVSTNQKIDYDLHQAPNLPTFHVEQRVPISGQIPGLAHDCVSKDDSIQSMMGMNPKLKLDCTKPPSDDDLFDVLGVDLKNKLLNGNWNKLFADELDANTENMDKKSEPMNIPDSGIFSGTGTDHLLDAVVSKAKSVVKQDSDDMSCRTTLTRNSTSSVPSPSCRPVMSGNFQGGLFDFPKNGGKTGATEATFLRSRCNKEDAGNCSQTSSTYGSQLSSWVENSGSVKRENSVSTGYSKRPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIVVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGKESSSNAMDNNMVYHSFPQAAQIAATGGPSSLQ 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03161 928 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 922 IPR043561 GO:0003700|GO:0006355
Viun5g03161 928 MobiDBLite consensus disorder prediction 665 702 - -
Viun5g03161 928 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 177 IPR025610 -
Viun5g03161 928 MobiDBLite consensus disorder prediction 706 731 - -
Viun5g03161 928 CDD bHLH_AtLHW_like 720 789 - -
Viun5g03161 928 MobiDBLite consensus disorder prediction 665 731 - -
Viun5g03161 928 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 716 765 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03161 Viun-Chr5 42587713 42593562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03161 533 904 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 57.407 3.93e-120 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03161 - - gmx:100787748 1430.62