Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03155 ATGGAGGTGGCTGATCCTGTCCAATTACTCAGTGCCAAAACAGTGCTAAACAGGATCAAAGAGGTTGAGCGTGGTGCAGTTTCGGTCCTCATTGAGCTACTTCTTTGTGCCTCGGAAAGAAGAACTTGTGAACTCATTTTAATAGCTTCGGATCAACTTTGTGGGTGTGCAGAAGGGCGTGCAGATTTGTTGAACCATGGTGCAGAAGTGGTCATTGTGTCAAAGAAAATTCTAAGGGTCTCTCTCGTGGCAAGTGATAGAGGGTTTAGAATTTTGGCCTCCATTTGTAGATATTCCGCCAATGCTAGAGTGCTCCATGAAATGTTGCAGGTTGGGGCTGTGTCAAAGTTGTGTTTGGTTCTTCAAGAGAATTGCAGTTTCAAGACCAAAGAGAGGGCCAAGGAAATACTCAGATTGCACTCCTCAGTTTGGAAGAATTCTCCATGTATTCCTGTACCTTTGTTATCTTCTTTTCCTTGA 480 0.4396 MEVADPVQLLSAKTVLNRIKEVERGAVSVLIELLLCASERRTCELILIASDQLCGCAEGRADLLNHGAEVVIVSKKILRVSLVASDRGFRILASICRYSANARVLHEMLQVGAVSKLCLVLQENCSFKTKERAKEILRLHSSVWKNSPCIPVPLLSSFP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03155 159 PANTHER WDSAM1 PROTEIN 14 151 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03155 Viun-Chr5 42512287 42512843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03155 17 159 U-box Gene Family AT2G35930 56.164 4.48e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03155 - - vun:114184737 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03155 5 42512287 42512843 Viun5g03155 5 42512287 42512843 ECH
Viun5g03155 5 42512287 42512843 Viun11g01654 11 32774295 32775895 PCT