Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03144 ATGGGTGTATCAGGGAAATGGATTAGAGCATTGATTGGTCTAAAGAAATCAGAAAAGCCAGAGTCTTCTCAGAAGGACGGAAATAAGGTTGGCAAGTTACATCATCAACGAAGGCAAGCTGTTGAATTTGATAATGGTAAACTTTCAAACGAATTGGATTGTGAAGCTACTCCACCTATTGGAGATGATAATGTCCGTGCAAACCTTGATGCCCATTATTCGTCTTCTTCTTCCCAACAAGCACCTGATGCTGCACATGATCAACAGATGAGGGAGGAACGGGCGGCAATACACATTCAAACAGCATTTCGAGGATTTTTGGCCAGAAGAGCATTACGAGCCTTGAAAGGTGTGGTAAGGCTTCAGGCCCTAGTAAGAGGCCATGCAGTGAGAAAACAAGCAGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGGCGTGTTTGCATGGCTTTGGAAACTCAAGCATCACAACAGAAACTTCAGCAAAACCTTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGATATTCAGGCTAAGATATTGAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAACAGCCAGTTTCCTCTGGATTTGAACCAGACAAAAGTAGCTGGGGTTGGAATTGGTTAGAAAGATGGATGGCTGTCCGGCCTTGGGAGAACCGCTTTGTTGACATTAATGTGAAGGATGGGGTAACTGTGCATGAAAATGAAGCTAAGGATGGTAAAAGTGGAACCACACCTCAGTTGAGCTCTGCTAACAAGAAACCATTCTCATCAAACACACATCCAAAACCAGCAAATCATGGAACTGGTCCCACTATTTCTGATGAGTGTGATTCTTCACCTAGTAAGTCTGCTGGTTTGCTAGAATCATCAAAAACACAATCCGTTAAGCTAACTCCTAAGGGTAATGTTGAAAATGCTGCTGAAGAAGTGAACTCAAAACTTAGAATTGGGTCAAGATCTCACAGTAATCCAAAGGAGAGAACATCCCAGGTAGATAAGCAGGCGAAAAAACGATTATCTCTGCCTAACAATGGGGGTGGTGCAGGATCTCAAATAGTCAAACACCCGATTAGTACTACTAACGTGAAAGGGACGCTAAGCACACACAAGTCTAGTAGGGATAAGCCTAAGCTCAATGGAAGAAGGGATGTGAATACAAAATCAGATCCATAG 1293 0.4377 MGVSGKWIRALIGLKKSEKPESSQKDGNKVGKLHHQRRQAVEFDNGKLSNELDCEATPPIGDDNVRANLDAHYSSSSSQQAPDAAHDQQMREERAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKLQQNLANEARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINVKDGVTVHENEAKDGKSGTTPQLSSANKKPFSSNTHPKPANHGTGPTISDECDSSPSKSAGLLESSKTQSVKLTPKGNVENAAEEVNSKLRIGSRSHSNPKERTSQVDKQAKKRLSLPNNGGGAGSQIVKHPISTTNVKGTLSTHKSSRDKPKLNGRRDVNTKSDP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03144 430 MobiDBLite consensus disorder prediction 408 430 - -
Viun5g03144 430 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Viun5g03144 430 MobiDBLite consensus disorder prediction 280 340 - -
Viun5g03144 430 MobiDBLite consensus disorder prediction 14 67 - -
Viun5g03144 430 PANTHER IQ-DOMAIN 5-RELATED 1 387 - -
Viun5g03144 430 SMART iq_5 114 135 IPR000048 GO:0005515
Viun5g03144 430 SMART iq_5 91 113 IPR000048 GO:0005515
Viun5g03144 430 MobiDBLite consensus disorder prediction 273 430 - -
Viun5g03144 430 Pfam IQ calmodulin-binding motif 93 113 IPR000048 GO:0005515
Viun5g03144 430 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Viun5g03144 430 MobiDBLite consensus disorder prediction 393 407 - -
Viun5g03144 430 Gene3D - 89 134 - -
Viun5g03144 430 MobiDBLite consensus disorder prediction 359 374 - -
Viun5g03144 430 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Viun5g03144 430 MobiDBLite consensus disorder prediction 14 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03144 Viun-Chr5 42432440 42438849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03144 1 430 IQD Protein Family AT3G22190 55.149 5.81e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03144 - - gmx:100781346 661.373