Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03137 ATGGGTGTATCAGGGAAATGGATTAGAGCATTGATTGGTCTAAAGAAATCAGAAAAGCCAGAGTCTTCTCAGAAGGACGGAAATGTTGGCAAGTTACATCATCAACGAAGGCAAGCTGTTGAATTTGATAATGGTAAACTTTCAAACGAATTGGATTGTGAAGCTACTCCACCTATTGGAGATGATAATGTCCGTGCAAACCTTGATGCCCATTATTCGTCTTCTTCTTCCCAACAAGCACCTGATGCTGCACATGATCAACAGATGAGGGAGGAACGGGCGGCAATACACATTCAAACAGCATTTCGAGGATTTTTGGCCAGAAGAGCATTACGAGCCTTGAAAGGTGTGGTAAGGCTTCAGGCCCTAGTAAGAGGCCATGCAGTGAGAAAACAAGCAGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGGCGTGTTTGCATGGCTTTGGAAACTCAAGCATCACAACAGAAACTTCAGCAAAACCTTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGATATTCAGGCTAAGATATTGAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAACAGCCAGTTTCCTCTGGATTTGAACCAGACAAAAGTAGCTGGGGTTGGAATTGGTTAGAAAGATGGATGGCTGTCCGGCCTTGGGAGAACCGCTTTGTTGACATTAATGTGAAGGATGGGGTAACTGTGCATGAAAATGAAGCTAAGGATGGTAAAAGTGGAACCACACCTCAGTTGAGCTCTGCTAACAAGAAACCATTCTCATCAAACACACATCCAAAACCAGCAAATCATGGAACTGGTCCCACTATTTCTGATGAGTGTGATTCTTCACCTAGTAAGTCTGCTGGTTTGCTAGAATCATCAAAAACACAATCCGTTAAGCTAACTCCTAAGGGTAATGTTGAAAATGCTGCTGAAGAAGTGAACTCAAAACTTAGAATTGGGTCAAGATCTCACAGTAATCCAAAGGAGAGAACATCCCAGGTAGATAAGCAGGCGAAAAAACGATTATCTCTGCCTAACAATGCAGGGGGTGGTGCAGGATCTCAAATAGTCAAACACCCGATTAGTACTACTAACGTGAAAGGGACGCTAAGCACACACAAGTCTAGTAGGGATAAGCCTAAGCTCAATGGAAGAAGGGATGTGAATACAAAATCAGATCCATAG 1293 0.4385 MGVSGKWIRALIGLKKSEKPESSQKDGNVGKLHHQRRQAVEFDNGKLSNELDCEATPPIGDDNVRANLDAHYSSSSSQQAPDAAHDQQMREERAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKLQQNLANEARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINVKDGVTVHENEAKDGKSGTTPQLSSANKKPFSSNTHPKPANHGTGPTISDECDSSPSKSAGLLESSKTQSVKLTPKGNVENAAEEVNSKLRIGSRSHSNPKERTSQVDKQAKKRLSLPNNAGGGAGSQIVKHPISTTNVKGTLSTHKSSRDKPKLNGRRDVNTKSDP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03137 430 Gene3D - 88 133 - -
Viun5g03137 430 SMART iq_5 113 134 IPR000048 GO:0005515
Viun5g03137 430 SMART iq_5 90 112 IPR000048 GO:0005515
Viun5g03137 430 MobiDBLite consensus disorder prediction 408 430 - -
Viun5g03137 430 MobiDBLite consensus disorder prediction 272 430 - -
Viun5g03137 430 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Viun5g03137 430 Pfam IQ calmodulin-binding motif 92 112 IPR000048 GO:0005515
Viun5g03137 430 MobiDBLite consensus disorder prediction 358 373 - -
Viun5g03137 430 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Viun5g03137 430 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Viun5g03137 430 MobiDBLite consensus disorder prediction 279 339 - -
Viun5g03137 430 MobiDBLite consensus disorder prediction 393 407 - -
Viun5g03137 430 MobiDBLite consensus disorder prediction 71 90 - -
Viun5g03137 430 MobiDBLite consensus disorder prediction 15 43 - -
Viun5g03137 430 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03137 Viun-Chr5 42432432 42438849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03137 1 430 IQD Protein Family AT3G22190 54.795 9.98e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03137 - - gmx:100781346 672.159