Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03134 ATGGATCCCTTCGTCCACAAGCTCCGTCGCCACCTTCGCGCATGGCTTCACCGATCTCGCTCCGGTGCGGTGTTTTTCGTGCGGAGAATTTCCTATAAAGATGTTCGAAGAGCAACGGATGGCTTCCACAGAATTGTATATAGCAATTCCGATGTTTCTGCGTATGCTGCCAGGTTTGAAGACAGTGGCGGCCTTTGTTTGGTGAGAGAAGTGAAAGGCTTCGATGAAGGAAGCGATCATTTTTACAGACACGTGCAGTTCTTGGGACGCTTGCGGCATCGCCACCTTCTCTCGCTCAAAGGTTTTTCCGTCGGGCGCAATCGCAAGAGATTGCTCATATTTGACAACATAGAAAATGGAAGCTTGAAGGATCATCTAAACGACCCTTTGAAAACTCCCTTAGATTGGAGAACAAGGTTGCAGATAGCCAATGGCGTTGTGGCTGCACTGGAATATTTGTTTCTCTTCAGTGAACCACCCGTATGTCATGTCTCTATCACCTCAAGCAATATTATGTTAGATGAAAACTTCACAGCCAAGCTATCTGACTTTGGCCTTCTTCCATCTGGTGGAAATTCTGATATGATGCCATATTCAGAAGACTGCTTGAAGCAGAAAAGTTGTAGGATTATATTCCAGCTTGGAGTGCTCATACTAGAACTGGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCCGATTTAATTGAATGGATCCAAGAATCACGATTTTACAGTTCCATTGATAAGATGATAGACCCTGATCTAGGTAACAATTATGACTGTACGGAGCTTAAAAGTCTTCTCGCTGTGGCAAAACTATGTATCAAATCATGGGACAAGCCTTCATTTACAATTCCTCAGTTATTCCGGCATCTCCAGAGGAAGATTGATATTACTCATCATCAATAG 909 0.4411 MDPFVHKLRRHLRAWLHRSRSGAVFFVRRISYKDVRRATDGFHRIVYSNSDVSAYAARFEDSGGLCLVREVKGFDEGSDHFYRHVQFLGRLRHRHLLSLKGFSVGRNRKRLLIFDNIENGSLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLPSGGNSDMMPYSEDCLKQKSCRIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYSSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQRKIDITHHQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03134 302 FunFam probable receptor-like protein kinase At1g49730 211 300 - -
Viun5g03134 302 PANTHER OS01G0253100 PROTEIN 27 297 - -
Viun5g03134 302 ProSiteProfiles Protein kinase domain profile. 32 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03134 302 FunFam Protein kinase superfamily protein 16 115 - -
Viun5g03134 302 SUPERFAMILY Protein kinase-like (PK-like) 24 268 IPR011009 -
Viun5g03134 302 Gene3D Phosphorylase Kinase; domain 1 10 115 - -
Viun5g03134 302 FunFam Protein kinase superfamily protein 117 207 - -
Viun5g03134 302 Pfam Protein tyrosine and serine/threonine kinase 78 190 IPR001245 GO:0004672|GO:0006468
Viun5g03134 302 Gene3D Transferase(Phosphotransferase) domain 1 211 301 - -
Viun5g03134 302 Gene3D Transferase(Phosphotransferase) domain 1 117 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03134 Viun-Chr5 42417597 42420371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03134 13 300 Receptor kinase-like Gene Family AT3G19300 35.370 4.43e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Viun5g03134 PK_Tyr_Ser-Thr 9.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03134 - - gmx:100791979 548.125