Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03116 ATGTCATTATCACCGCCACCTCTCGTAACGGCGGCGACGGCCACAGATCTTCCGGTCCGCCAGATTCCGGGAAGCTACGGGTTCCCGTTGCTGGGCCCCTTATCGGACCGACTCGACTACTTCTGGTTTCAGAAACCGGAGAGCTTCTTCAAGAAGCGAATGGAGAAGTACAAGAGCACGGTGTTCCGCACCAATGTTCCTCCCTCCTTCCCCTTCTTCGTCAACGTCAATCCCAACGTCATCGCAGTTCTCGATGTCAAATCCTTCTCCCACCTCTTCGACATCGACCTCGTCGACAAGAAGAACGTTCTCGTCGGAGACTTTGTCCCCGACGTCAGCTTCACCGGAAATATGAGGGTCGGTGTCTACCAGGACCCCTCCGAACCTCAACATTCCAAGGTGAAGGCCTACATAATAGATATCCTGAAACGAAGCTCGGGAATATGGGCATCAGAACTCGTGTCCAACCTAGACGTTTTCTGGGACAACATCGAATCATCACTCTCAAAATCTTCACCTGCTTCCTATTTCTTGCCTCTGCAACAATTTCTCTTCACTTTCCTCTGCAAAGTTCTGGCAGGTGCAGACGCTTCTCGTGACCCCAAAATCGCAGAGTCAGGCCACATCATGCTTGATCGATGGCTTGCCCTTCAGCTCCTCCCCATCACCAGCATCGGCATTCTCCAACCCTTGGAAGAAATCTTCCTCCATTCCTTCGCTTACCCTTCCTTTCTCGTTAGTGGAGACTACAACAACCTCTACAACTTCGTCAAGCAACAAGGGAAGGATACCATAAACAGAGGCGAAATCGGGTTCGGGTTGACCCAAGAAGAGGCGATCCACAACCTACTCTTCGTGCTAGGGTTCAACTCCTTCGGGGGCTTCACCATTTTCCTTCCAGCTTTGTTTGGTGCCATAGCGAAAGACCCCGCGTTGCAGGAGAAGCTGAAGAAGGAAGCCAGGGAAAACGGCGGCTCAACGTTGAGCTTTGACTCCGTCAAAGAGATGCCTCTGGTCCAATCGGTGGTGTACGAAACGCTGCGTATGAGCCCTCCGGTTCCGCTGCAGTTCGGTCGCGCCCGAAAGGACTTCCGTTTGACTTCTCACGACTCCGTTTTCGACGTGAAGAAGGGGGAGTTGCTATGCGGCTTCCAGAAGATCGTTATGAGAGACTCTCTCATCTTCGACGAACCGGACCTCTTCAAACCGGACCGGTTCACGGAGGAAAAAGGGGCCAAGTTGCTGGACTACTTGTACTGGTCCAATGGGCCTCAAAGTGGGTCACCCACTCTGTCCAATAAACAGTGCGCCGGCAAGGACGTTGTCACCCTCACTGCGGCCTTGATTGTGGCTCACCTCTTTCGCAGGTACGATTCCATCACCGGCGATGGAGGTTCCATCACTGCCCTTCAAAAGCCTAAGTGA 1425 0.5291 MSLSPPPLVTAATATDLPVRQIPGSYGFPLLGPLSDRLDYFWFQKPESFFKKRMEKYKSTVFRTNVPPSFPFFVNVNPNVIAVLDVKSFSHLFDIDLVDKKNVLVGDFVPDVSFTGNMRVGVYQDPSEPQHSKVKAYIIDILKRSSGIWASELVSNLDVFWDNIESSLSKSSPASYFLPLQQFLFTFLCKVLAGADASRDPKIAESGHIMLDRWLALQLLPITSIGILQPLEEIFLHSFAYPSFLVSGDYNNLYNFVKQQGKDTINRGEIGFGLTQEEAIHNLLFVLGFNSFGGFTIFLPALFGAIAKDPALQEKLKKEARENGGSTLSFDSVKEMPLVQSVVYETLRMSPPVPLQFGRARKDFRLTSHDSVFDVKKGELLCGFQKIVMRDSLIFDEPDLFKPDRFTEEKGAKLLDYLYWSNGPQSGSPTLSNKQCAGKDVVTLTAALIVAHLFRRYDSITGDGGSITALQKPK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03116 474 Pfam Cytochrome P450 302 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g03116 474 PANTHER CYTOCHROME P450 26 17 457 - -
Viun5g03116 474 Gene3D Cytochrome P450 17 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g03116 474 FunFam Allene oxide synthase, chloroplastic 17 472 - -
Viun5g03116 474 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g03116 474 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g03116 474 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g03116 474 CDD CYP74 51 466 - -
Viun5g03116 474 SUPERFAMILY Cytochrome P450 18 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03116 Viun-Chr5 42285799 42290971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03116 95 474 Cytochrome P450 AT4G15440 58.854 7.57e-172 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03116 K10528 - gmx:100784395 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03116 5 42285799 42290971 Viun5g03116 5 42285799 42290971 ECH