Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03071 ATGGCTGACTCCAATACCTCTTCCACTCAAACTTCTTCACATTCTTCTGTGAAAGATGACAGAACCTGTTTAGATTCAGGGAAGGTTGAATTTTCTGAAGACGAGGAAACTCTTATCATCAGGATGTATAAACTGGTTGGGAAAAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACAGCAGATGAAATAGAGAAGTATTGGACTTCGAGACTCTCGAGTTCTCGTGAATGA 237 0.4093 MADSNTSSTQTSSHSSVKDDRTCLDSGKVEFSEDEETLIIRMYKLVGKRWSLIAGRIPGRTADEIEKYWTSRLSSSRE 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03071 78 ProSiteProfiles Myb-like domain profile. 28 73 IPR001005 -
Viun5g03071 78 FunFam MYB-like transcription factor 30 72 - -
Viun5g03071 78 MobiDBLite consensus disorder prediction 1 17 - -
Viun5g03071 78 MobiDBLite consensus disorder prediction 1 22 - -
Viun5g03071 78 CDD SANT 30 73 IPR001005 -
Viun5g03071 78 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 30 75 - -
Viun5g03071 78 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 77 IPR017930 -
Viun5g03071 78 SMART sant 27 75 IPR001005 -
Viun5g03071 78 Gene3D - 30 75 - -
Viun5g03071 78 Pfam Myb-like DNA-binding domain 28 71 IPR001005 -
Viun5g03071 78 SUPERFAMILY Homeodomain-like 30 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03071 Viun-Chr5 41811974 41813330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03071 31 74 MYB Transcription Factor Family AT5G14750 59.091 2.18e-16 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun5g03071 Myb_DNA-binding 1.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03071 - - gmx:100801532 105.145