Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03066 ATGTTAGTTAGCTGCATGGACCATCTCTATGATTTGTCATATTTCTTGCAGCCTAACCTCAAGGACTATAAATCACTGGCCACTGTTGTGGAAACAGCAGCAGAGAGAAATGCAATTTCCTCTTTCAAGAAGCATCTGAGTGTCACATATTATATTGTTCATACTATATTTAGTCACCAAGCTTCTTGGATTTCTGCTAGCTACATGAAAATGGGAAGTCACTTCAGGTTTTTGAGTCTTTGCCTCTTGGCATTGGTTGCATCAACTCATGCTCAACTTCAATTTGGTTTTTATGCCAAGAGCTGCCCAAAAGCTGAGCAAATCATCTTGAAGTTTGTTCATGAGCATATCCACAATGCTCCTTCTCTAGCAGCTGCATTGATCAGAATGCACTTTCATGATTGTTTCGTCAGGGGATGTGATGGATCAGTGCTACTAAACTCAACAACCAATCAGGCTGAAAAGAATGCTCCTCCAAATCTCACTGTCAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGCGTGGTTTCTTGTGCTGATATCCTAACTTTGGCAGCCAGAGACACCATTGTAGCCACAGGTGGACCCTTTTGGAAAGTTCCAACAGGTAGAAGAGATGGGGTAGTTTCTATCTTGGAGGAAGCCAGAAATAACATTCCTGCTCCATTTGACAACATCACCACCCTGCAAACACTCTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTGCTTCTCTCTGGTGCTCACACAATTGGTGTGGCTCATTGCTCATCATTATCAAACCGCTTGTTCAACTTTACTGGGAAGGGTGATCAAGACCCTTCACTGGACAGTGAATATGCTGAAAATCTGAAAACCTTCAAGTGCAATGACATCAACAAGTTGAATACCACAAAGATTGAGATGGACCCTGGAAGCCGCAAGACATTTGACCTTGGTTACTACAGACAAGTGATTAAGAGAAGGGGCTTATTCGAGTCAGATGCTGCATTGTTGAATAATGCAGTTACTAAGGCTCAAATCATCGAATTGCTTGAAGGGTCAGTTGAAAATTTCTTTGGTGAGTTTGCCAGCTCCATTGAGAAAATGGGAAGAATTAAGGTGAAGACAGGGACAGAAGGAGAGATCAGGAAGCATTGTGCATTTGTAAATAGCTAA 1185 0.4228 MLVSCMDHLYDLSYFLQPNLKDYKSLATVVETAAERNAISSFKKHLSVTYYIVHTIFSHQASWISASYMKMGSHFRFLSLCLLALVASTHAQLQFGFYAKSCPKAEQIILKFVHEHIHNAPSLAAALIRMHFHDCFVRGCDGSVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDTIVATGGPFWKVPTGRRDGVVSILEEARNNIPAPFDNITTLQTLFANQGLDLKDLVLLSGAHTIGVAHCSSLSNRLFNFTGKGDQDPSLDSEYAENLKTFKCNDINKLNTTKIEMDPGSRKTFDLGYYRQVIKRRGLFESDAALLNNAVTKAQIIELLEGSVENFFGEFASSIEKMGRIKVKTGTEGEIRKHCAFVNS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03066 394 FunFam Peroxidase 96 238 - -
Viun5g03066 394 Gene3D - 96 393 - -
Viun5g03066 394 PANTHER PEROXIDASE 25-RELATED 83 386 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 FunFam Peroxidase 228 372 - -
Viun5g03066 394 SUPERFAMILY Heme-dependent peroxidases 92 393 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 CDD secretory_peroxidase 92 392 IPR033905 GO:0004601|GO:0042744
Viun5g03066 394 Gene3D Peroxidase, domain 2 228 372 - -
Viun5g03066 394 ProSitePatterns Peroxidases active site signature. 124 135 IPR019794 GO:0004601
Viun5g03066 394 ProSitePatterns Peroxidases proximal heme-ligand signature. 250 260 IPR019793 -
Viun5g03066 394 PRINTS Haem peroxidase superfamily signature 312 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Haem peroxidase superfamily signature 124 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Haem peroxidase superfamily signature 202 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Haem peroxidase superfamily signature 184 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 102 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 310 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 183 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 326 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 249 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 126 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 164 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 202 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 PRINTS Plant peroxidase signature 367 380 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 ProSiteProfiles Plant heme peroxidase family profile. 92 393 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g03066 394 Pfam Peroxidase 111 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03066 Viun-Chr5 41777826 41779696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03066 77 393 Peroxidase AT4G11290 68.339 5.90e-164 461