Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03056 ATGGAACCTATGTGTGAGTTTTGTTGGGCTGTGAGAGCTGTGGTATACTGCAAGTCAGATTCTGCTCGTCTCTGCTTGCATTGCGATGGTTGTGTGCACTCTGCAAATTCTCTGTCTCGCAGGCATTCGCGTTCTCTCCTTTGTGATAAGTGCAATTCCCAGCCAGCAATGATAAGATGCATGGATCATAAGTTGTCCTCGTGTCAAGTTTGTGACTGGAACCCGAATGATTGTTCTGCAGTGGGACATAGGCGTCTCACACTGAATTGTTACTCTGGTTGTCCTTCTTTGACTGAGTTTTCTAGGATGTGGTCCTTTGTTTTTGAAGTTAGTTCTTCACAAGGTGGTTGGGAATCTGTTAGCACTTTGCCAAAAAGTGAGAGCTGCACTAGCCTGGAGCAACCTGATCACAATGGTGGTTCCTTTGGTTTGGTGAGTGAGAAGTTGGATGAAATTGAATCTTGTGTCAGATATGAACCTTGGATGGGGCAATCTCACATCATTCCTTCAAATCCAAATTACACACCGTACGGCAAAGAAGACGGATTTTTCCTGGCTCAGGACTCAAACCAGCCAAAGCCGCAGGAGTGTACTGATCGAGGAACTGGTGATGGGAATGTACTCTCTGAAGGTCTCAATGTGGACAGCGGTCCAATAAATTTTGAAAGTGCTGATGAAATATTTGGCTGTTCACAAGCTGCCACAAGATACCCTCTTGAAGATGGAGGAATGGACTGTCTGTTGATGGATAAAAAACTATCAGTCACCGAATCCAGCTCACTTATTGAGAGTGCCTTAGAGGCATCATCATCAATTCAACAAGATTGTGTGGCTTTTCAGTCATCTAGGACTGGTGGATCAGTTAGTATGTTGCCGGTTATGAACAGTAACACAAACTGTGCACTTATGAATCCTAGCAGCACTGGCAACATCAGTCTGGGATTTCCTCAGGGTCAAGTTCATTCAAGCATACCTCTTCAATTAGGCAACATTGTGGGTGAAAATAGTTCTACTGAATATCAAGACTGCGGGATATCGGCAATGTTTTTGCCGGGTGAAATCCCCTGGGAATCAAATTTGGAGGGTACATGCCCACAAGCAAGGGATAAGGCTAAAATGAGATACAATGAGAAAAAGAAAACTCGAACGTATGCACCCTTAATTCTCTACATATTTTATGGTTTGGTAAGCAAATAA 1197 0.4369 MEPMCEFCWAVRAVVYCKSDSARLCLHCDGCVHSANSLSRRHSRSLLCDKCNSQPAMIRCMDHKLSSCQVCDWNPNDCSAVGHRRLTLNCYSGCPSLTEFSRMWSFVFEVSSSQGGWESVSTLPKSESCTSLEQPDHNGGSFGLVSEKLDEIESCVRYEPWMGQSHIIPSNPNYTPYGKEDGFFLAQDSNQPKPQECTDRGTGDGNVLSEGLNVDSGPINFESADEIFGCSQAATRYPLEDGGMDCLLMDKKLSVTESSSLIESALEASSSIQQDCVAFQSSRTGGSVSMLPVMNSNTNCALMNPSSTGNISLGFPQGQVHSSIPLQLGNIVGENSSTEYQDCGISAMFLPGEIPWESNLEGTCPQARDKAKMRYNEKKKTRTYAPLILYIFYGLVSK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03056 398 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 384 - -
Viun5g03056 398 CDD Bbox1_BBX-like 5 47 - -
Viun5g03056 398 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Viun5g03056 398 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03056 Viun-Chr5 41740698 41744673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03056 1 390 C2C2-CO-like Transcription Factor Family AT3G21880 38.422 8.57e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03056 - - vra:106761521 717.613