Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03042 ATGGGCGATGGAGGCGTCCCGTGCATGCCTTTGCAGTATATTATGGAGAGGTTGCCGAGTTCCGAGAAGACTGTTGTGTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGTTCAAGTTTGCTGGCAATGAGAGGAGGAAGATGAAGGCGAGAAAGAGTGAATTGGGGTTAGACAGAGTGAGCAAGAGGAGCAGCAATGATGTTGAGAATGGTGGCGAAGTGGAGAAGCAGCAAGAGAAGGTTCAGAAGGAGGAAGTGGAAGAGGGTGAATTGGGCACTTTGAAGTGGCCTAGGACTGACCTGGAAAATGGGGAGTTCGTGCCAGAGATGCCGCCACCACCCCCGCTGAGGAAGGGCGAGATTGAGAACGGGGAGATTGTGAGTGAGAAGTGGAAAGGAAGGGAGCTGGAGAAGGGGGAGATTGCTTCTGGGAAATGGAGGAAAGAGGATGTTGAAAGAGGGGAGATAGTTCCTGAGAAGGGTGGTAGGAAAGGGGAAGCCGAGAGAGGTGAATATGGGTCGTGGAGAGGTGTAAATGATGAAATCGAGAAGGGAGAATTCATTCCGGATAGATGGTACAAGGGAGATTATGATAACAGTAGAATCCGCAGGTACCATTCAGGTAGGGACAAAGGGTGGAAAATTGAACGTGAACGTGAAAGTACACCTTCTTCTGGGAGATATTCTGGGGATGATTTTTTTAGGAAGAAAGATTTGAATATTCGTGGCAGTCAGCATCCTAAAAGTTCTCCCAGGTGGGAGGGTGGACAACAGCGGAATGTAAGGATAAGTTCTAAGATTGTGGATGACGAGAAGAACGTTCACAGCAATGGTAAGGACCATGCACGAGATTACACTTCTGGAAGTCGCTTGAAGAGGCTTGGCAATGATTCTGACAGCTATGAGCGGAAGCATTCTGCAGATTATGCCGGTTTAAAAAGCCGAAGACTTTCTGATGATAGCTGTCGCCAAGTTTATTCAGAAAACTATTCTCGTCGTTCTGTGGAACGGTCTTACCGAACTAATAATGCTACCAAATTATCGGCAGATAAATATTCAAGTAGGAATCATGAATCTTCTTTGTCTATTAGACAGGTTTATGACAGGCATGGGCGCAGCCCTGGTCATTCTGAGCGATCCCCACGTGACCGAGGTAGGTATTATGATCATAGGGATCGAACTCCAGTACGCAGGTCTCCTTGTGGTCGTGACAGATCTCCGTATAACCGGGAGAAGTCCCCACATGGACGGGAGAGGTCCCCATATCCGTATAACCGGGAGAAATCCCCCCATGGTCGGGAGAGGTCGCCATATACAAGGAACTGGGACAGAAGTCGTCAGCCTGATCATAAATTGAGAAGTCCAACTCGTTCTGAGCAGTCGCCACCTGATCGCAGTCGGCGACACGATCCTAAGGATAGTACCACAAATTTGTCAGAAGCATCTCCCCTTGATCAGGCTAGGAAAGACGGTCGACGTGATTCAGGTTGTAAAACCTTACCAAGTGAAAAACATGATTCCCAAAATTGTTGTAAGGATCATGAAGATAAGCAGACTCAGAGGGATTCAAACTGTTCAAGTACCGAATCTCAGAATGAAAAAAGTGTGCAAGAGTCCATTAAGTCTGTTGAGAAAGACATCTGCAATCAACCCTTAAACGAACACCGGAGTTGCAGCCCAACCCTTACCCACAAAGAATCTCCTCAATCCGAGCCCCCTCCTGAGGAGATGCCTTCTATGGAGGAGGATATGGACATTTGTGATACCCCTCCACATGTCCCTGTGGTGACAGATTTGTCTTCAGGGAAATGGTATTACCTGGACTATGGTGGTGTGGAAAATGGGCCTGCTAAATTGTGCGACATCAAGGTCCTTGTGGAGGAAGGTGTACTAATGTCAGATCACTTTATCAAGCACATAGATAGTGACAGGTGGTTAACAGTTGAAAATGCCGCGTCACCTTTGGCACCTCCGAACTTTCCTTCAATTGTGTCGGATAGCATAACTCAACTGGTAAATCCCCCAGAAGCTCCTGGTAATATCTTGTCAGATACAGCTGATATTTTTCAATCCGCTCATGAGAATCACCAGGAAATGCTAACCTCCTCGCCGCCTCCACTAGTGTGCCCCATTGACAGTTTGCGTTCGTCTGAACTTTTGGAGGACTTCCACATTGATGAAAGAGTTAAACATCTCTTGAAGGGTTATGATGTCACTCCTGAGATGGAACCTGAGGCAATAAAAGAAGTGTTGCTAATGAATTTTGAAAATGCAAGAGGGGAGGGATCGAGAGATTATGAAGGTTTTCCTTGGAATGCTTCCTGCCTCGGGGAAGATTATGATTCAAGTACTGATTTAGCATCTAGAGATTCTGAGTCTCAGTTAAGTATGTCATCTGATAAGGATAATGGACTAGGCTTTGGTATTTCTAGTGACTGGTTTTCCACCCGTTGGTCATGTAAAGGTGGTGACTGGAAGAGGAATGATGATTCCATGGATAGATATTCTAGAAAGAAACTTGTGCTAAATAATGGTTTTTCGTTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGAATTGTATTTTCCTTCTCAAAACAAGAGGCTTGATCTTCCTCTGTGGGCTTTCTGTGCTGATGAGCGGGATGAAAGCAGTGCTGCAGGTAGATCAGTTCAAAGTAAGCCTGTTTCTGTGAGAGGAGTGAAAGGCAATGTTCTTTCAGTGGTCAGGATAAATGCATGTGTAGTAAAGGACCAGGGGTCATTGGTCTCTGAGTCACGCCACAAGACGCGGGGCAAGGAAAGACATCATTCTAGATCAAATCGGCCTTTCTCTGCAACCAGTGATAGCAAGAGATCATCAACGGAACAGGATTCCCAGTTCAAAGCTTTTAGTGATCAAGGTTCTTACAGGATCATGGAATTCCTTAACACTCCTAAAGACCATCTCTGTACTATCCATGAGTTGCAATTACATTTGGGTGACTGGTATTATTATGATGGTTCTGGGCGTGAAAGGGGCCCCTCATCATTTTCAGAACTACAGTATTTAGTAGATCAAGGCATCATAAAAAAACATAGCAGTGTGTTCAGGAAAAGTGACAAACTCTGGGTTCCTATCACCTCTGCAACAGAAACATCTGATGGCAGTTTCCCGATCCAACAAGAAAGCAGTTCAATATCTGGTTTTTCATCAAAGCAAACTCAGGCATGTGGTGAACCTTACACAAATTCAAGTTTGTTTAACAGCTTGCATCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAGCTGGTGATGAAATCATATAAGAGCCGAGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAATTGAAAAACAACTATATTGGAAATCAGGGGATGCGCATGCTGCCAAGAGAGCCCGGCTTCTTGTTGATGATAGTGAAGATGACAGTGATTTGGAAGATGGTGATTTTACTATCGAGAAGGATGAATCTAGTTTTGAGGATCTATGTGGTGATGCTACTTTTCCTGAAGATGAAATTAGTGTTACTGATTCTCAAATGGGAAGCTGGGACAATTTGGATGGCCATGTGCTAGCACGGATTTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTTGCTTCATTGACTTGCAAGCGCTGGAGAGCTTCTGTAAGGTTTTATAAAGAAGTGTCAATGCAGGTCAATTTGTCATTCTTGGGTCATTCATGCACTGATGCCATGTTGTGGAACATTTTGAATGGATACGAGAAAGAGAAGATCAATTCTATAATTCTAAGGGGTTGTGTTAATATTACGGCTGAGATGCTTGAGAAAGTTCTTCTTTCATTTCCTGGTTTATTTACAGTAGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCTTAAATTTGCGAATGTGAAATGGATCAAGAGCCGAAGTTCACACTTGACTAAAATTTCTGAGGATCCTCACAAAATTAGAAGTCTTAAACATATTACAGAGCTAACCTCATCTGTTTCCAAATCCAGCAGTATAGGTATAGATGATTTTGGGCAATTGAAGGACTATTTTGATAGTGTGGATAAGAGAGATACCAAGCAATTATTCCGTCAAAACTTGTACAAGCGATCAAAACTATATGATGCTAGAAAGTCCTCCTCCATTCTATCGAGGGATGCTCGTACAAGACGTTGGGCAATCAAGAAAACTGAAAGCGGTTATAAGAGGATGGAGGAGTTCCTTGCTTCCAGACTCAGGGAAATTATGAAGACAAACTCTTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAGTGGTTATTACAGTAGCCGTGGGTTGAATTCTGTGAAAGACGACATAAGTAGAATGTGTCGTGATGCCATAAAAGTGAAGAATCGGGGTGATGCTAGTTACATGAATCATATTATCACACTGTTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCTAAATCTGTGCATGACAGAAATCTACTGAAATCGTGGGACAATGACTTGCCTGCAGTGTCCTGCTCTACTTTGTCAAAGTATAAGAAGAATAGGTTAGTGAATGAAAGGAAGTATAGGAGTAATGGGACACATGGTTTGGATAATGTGGAATATACCTCTGATCGAGAAATTAAGAGGCGATTATCAAAGTTGAACAAAAAATCTATGGACTCAGAGAGTGAAACATCTGATGATGATCTTGATATGTCTTATGAAGATGGAAAGAGTGACAGTGATACTACAACCTCTGACACTGAAAGTGAACGAGAAGTACATTCAGAAAGTCTGATTAGGGATTCAAGAGGGGAAGGATACTTGACATCTGAGGAAGAGTTGGATTTTATAACTGATGATCGAGAGTGGGGTGCACGCATGACAAAAGCAAGTTTGGTTCCTCCAGTTACCAGGAAATATAAAGTCATTGATCAATATTGCATTGTAGCCGATGAGGAGGATGTGCGAAGGAAGATGAGGGTTTCATTACCAGACGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTGAAAGATTACAAACCTAGAAAGCAGCTAGGATATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTTTACACACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGGCTCTGCCAGAGAAGCATTTGTTTATAGAAGATACACTCCTTCGAACATTGAATAAGCAAGGTAGAAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCGTTGCGGCCTGTTGTTGAAGATATTAAAAGACAAGCTGAGGAGGATTGTGATGCAAGAATGGTTAAAATGTGTCAAGGTATTCTAAAGGCCATGGACAGTCGTCCAGAAGACAAATACGTAGCTTATAGGAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGATTTGCAGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAAAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTACAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATATGGCTAATTATGCCAGTCGAATATGTCATTCGTGCAGACCTAACTGTGAAGCCAAGGTGACTGCCGTTGATGGTCAATATCAAATTGGTATTTATAGTGTTCGTAAAATTCAAAATGGTGAGGAGATCACTTTTGACTACAATTCTGTAACGGAGAGCAAGGAGGAGTATGAAGCATCGGTTTGTTTGTGTGGAAGCCAAGTATGCCGTGGGAGCTATCTGAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTTGATCGGCATTATTTGATGCTAGAAGCTTGTGAATTAAATTCTGTGTCTGAAGAGGACTATAATGACCTTGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCGGATTGGCTTGTTGCTTATGCGGCTCGCCTTGTGAGATTTATCAATTTTGAACGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATCTGGAAGAAAAGAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCCGAGGGTGTTTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTCATGAGATGTATTTTTGGCGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAACTGTTTCCTTCCTCTGGAAAGGCGAGGGTTCATTTGTTGAGGAGCTTCTTAAGTGCATCGCTCCTCATATTGAAGAAGAGATCTTGAAAGATCTCAAGCTTAAAATTCATGCTCACGATCCTTCACATTCAGTAGATATTCAAAAAGAGCTTCGCAAATCTTTGTTATGGTTGAGGGATGAGGTCCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGGATACAGAATTATCAAGCGATTACATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTCGGGAGCAGAATTTCAGGAGTACCGAAAGATATATGGTGAAAATTATTGTTTAGGACAGCTGATATTTTGGCATAACCAGAGTAATGCTGATCCAGATCGGAGCCTGGCTAGAGCTAGCAGGGGTTGCTTGTCTTTACCAGATACAAGTTCCTTTTATGCCAAGGCGCAGAAGCCCTCTCGACATTGTGTTTATGGTCCAAGGACCGTCAGATCTATGCTTGCTAGAATGGAGAAGCAGCCGCAGAGATCTTGGCCCAAAGACCGGATATGGTCGTTCAAAAGTTTTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAGTAAATAACTCTGCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAAGCCATGTGGGACCGTTAA 7161 0.4304 MGDGGVPCMPLQYIMERLPSSEKTVVCGGKSGNGFNSKLFKFAGNERRKMKARKSELGLDRVSKRSSNDVENGGEVEKQQEKVQKEEVEEGELGTLKWPRTDLENGEFVPEMPPPPPLRKGEIENGEIVSEKWKGRELEKGEIASGKWRKEDVERGEIVPEKGGRKGEAERGEYGSWRGVNDEIEKGEFIPDRWYKGDYDNSRIRRYHSGRDKGWKIERERESTPSSGRYSGDDFFRKKDLNIRGSQHPKSSPRWEGGQQRNVRISSKIVDDEKNVHSNGKDHARDYTSGSRLKRLGNDSDSYERKHSADYAGLKSRRLSDDSCRQVYSENYSRRSVERSYRTNNATKLSADKYSSRNHESSLSIRQVYDRHGRSPGHSERSPRDRGRYYDHRDRTPVRRSPCGRDRSPYNREKSPHGRERSPYPYNREKSPHGRERSPYTRNWDRSRQPDHKLRSPTRSEQSPPDRSRRHDPKDSTTNLSEASPLDQARKDGRRDSGCKTLPSEKHDSQNCCKDHEDKQTQRDSNCSSTESQNEKSVQESIKSVEKDICNQPLNEHRSCSPTLTHKESPQSEPPPEEMPSMEEDMDICDTPPHVPVVTDLSSGKWYYLDYGGVENGPAKLCDIKVLVEEGVLMSDHFIKHIDSDRWLTVENAASPLAPPNFPSIVSDSITQLVNPPEAPGNILSDTADIFQSAHENHQEMLTSSPPPLVCPIDSLRSSELLEDFHIDERVKHLLKGYDVTPEMEPEAIKEVLLMNFENARGEGSRDYEGFPWNASCLGEDYDSSTDLASRDSESQLSMSSDKDNGLGFGISSDWFSTRWSCKGGDWKRNDDSMDRYSRKKLVLNNGFSLCQMPKSGCEDPRWPQKDELYFPSQNKRLDLPLWAFCADERDESSAAGRSVQSKPVSVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRGKERHHSRSNRPFSATSDSKRSSTEQDSQFKAFSDQGSYRIMEFLNTPKDHLCTIHELQLHLGDWYYYDGSGRERGPSSFSELQYLVDQGIIKKHSSVFRKSDKLWVPITSATETSDGSFPIQQESSSISGFSSKQTQACGEPYTNSSLFNSLHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQLYWKSGDAHAAKRARLLVDDSEDDSDLEDGDFTIEKDESSFEDLCGDATFPEDEISVTDSQMGSWDNLDGHVLARIFHFLKSDLKSLVFASLTCKRWRASVRFYKEVSMQVNLSFLGHSCTDAMLWNILNGYEKEKINSIILRGCVNITAEMLEKVLLSFPGLFTVDIRGCNQFGELTLKFANVKWIKSRSSHLTKISEDPHKIRSLKHITELTSSVSKSSSIGIDDFGQLKDYFDSVDKRDTKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKTESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEAKMKSGYYSSRGLNSVKDDISRMCRDAIKVKNRGDASYMNHIITLFIQLATRLEESSKSVHDRNLLKSWDNDLPAVSCSTLSKYKKNRLVNERKYRSNGTHGLDNVEYTSDREIKRRLSKLNKKSMDSESETSDDDLDMSYEDGKSDSDTTTSDTESEREVHSESLIRDSRGEGYLTSEEELDFITDDREWGARMTKASLVPPVTRKYKVIDQYCIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGYEVIEQEVYGIDPFTHNLLLDSMPEELDWALPEKHLFIEDTLLRTLNKQGRNFTGTGSTPMSYPLRPVVEDIKRQAEEDCDARMVKMCQGILKAMDSRPEDKYVAYRKGLGVVCNKEEGFAEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQNGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEELLKCIAPHIEEEILKDLKLKIHAHDPSHSVDIQKELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQNYQAITSPPVYISPLDLGPKYTNKSGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDTSSFYAKAQKPSRHCVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKSFPKFFGSPMLDAVVNNSALDREMVHWLKHRPAIFQAMWDR 2386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03042 2386 MobiDBLite consensus disorder prediction 205 245 - -
Viun5g03042 2386 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1967 2386 IPR045606 -
Viun5g03042 2386 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 428 2386 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 246 265 - -
Viun5g03042 2386 Gene3D Ribonuclease Inhibitor 1201 1376 IPR032675 -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 147 172 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 205 584 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 931 971 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 50 125 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 525 570 - -
Viun5g03042 2386 Pfam SET domain 1898 1956 IPR001214 GO:0005515
Viun5g03042 2386 SUPERFAMILY SET domain 1831 1979 IPR046341 -
Viun5g03042 2386 SUPERFAMILY F-box domain 1203 1243 IPR036047 GO:0005515
Viun5g03042 2386 MobiDBLite consensus disorder prediction 487 524 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 364 477 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 266 324 - -
Viun5g03042 2386 CDD SET_SETD2-like 1830 1978 - -
Viun5g03042 2386 Gene3D SET domain 1799 1987 IPR046341 -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 952 971 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 325 363 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 1601 1631 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 50 97 - -
Viun5g03042 2386 CDD F-box_SF 1208 1241 - -
Viun5g03042 2386 SMART set_7 1822 1962 IPR001214 GO:0005515
Viun5g03042 2386 MobiDBLite consensus disorder prediction 784 803 - -
Viun5g03042 2386 MobiDBLite consensus disorder prediction 1577 1631 - -
Viun5g03042 2386 ProSiteProfiles SET domain profile. 1821 1956 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03042 Viun-Chr5 41618590 41634256 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun5g03042 SET 8.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03042 K22748 - gmx:100776205 4158.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03042 5 41618590 41634256 Viun5g03042 5 41618590 41634256 ECH