Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03041 ATGGGCGATGGAGGCGTCCCGTGCATGCCTTTGCAGTATATTATGGAGAGGTTGCCGAGTTCCGAGAAGACTGTTGTGTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGTTCAAGTTTGCTGGCAATGAGAGGAGGAAGATGAAGGCGAGAAAGAGTGAATTGGGGTTAGACAGAGTGAGCAAGAGGAGCAGCAATGATGTTGAGAATGGTGGCGAAGTGGAGAAGCAGCAAGAGAAGGTTCAGAAGGAGGAAGTGGAAGAGGGTGAATTGGGCACTTTGAAGTGGCCTAGGACTGACCTGGAAAATGGGGAGTTCGTGCCAGAGATGCCGCCACCACCCCCGCTGAGGAAGGGCGAGATTGAGAACGGGGAGATTGTGAGTGAGAAGTGGAAAGGAAGGGAGCTGGAGAAGGGGGAGATTGCTTCTGGGAAATGGAGGAAAGAGGATGTTGAAAGAGGGGAGATAGTTCCTGAGAAGGGTGGTAGGAAAGGGGAAGCCGAGAGAGGTGAATATGGGTCGTGGAGAGGTGTAAATGATGAAATCGAGAAGGGAGAATTCATTCCGGATAGATGGTACAAGGGAGATTATGATAACAGTAGAATCCGCAGGTACCATTCAGGTAGGGACAAAGGGTGGAAAATTGAACGTGAACGTGAAAGTACACCTTCTTCTGGGAGATATTCTGGGGATGATTTTTTTAGGAAGAAAGATTTGAATATTCGTGGCAGTCAGCATCCTAAAAGTTCTCCCAGGTGGGAGGGTGGACAACAGCGGAATGTAAGGATAAGTTCTAAGATTGTGGATGACGAGAAGAACGTTCACAGCAATGGTAAGGACCATGCACGAGATTACACTTCTGGAAGTCGCTTGAAGAGGCTTGGCAATGATTCTGACAGCTATGAGCGGAAGCATTCTGCAGATTATGCCGGTTTAAAAAGCCGAAGACTTTCTGATGATAGCTGTCGCCAAGTTTATTCAGAAAACTATTCTCGTCGTTCTGTGGAACGGTCTTACCGAACTAATAATGCTACCAAATTATCGGCAGATAAATATTCAAGTAGGAATCATGAATCTTCTTTGTCTATTAGACAGGTTTATGACAGGCATGGGCGCAGCCCTGGTCATTCTGAGCGATCCCCACGTGACCGAGGTAGGTATTATGATCATAGGGATCGAACTCCAGTACGCAGGTCTCCTTGTGGTCGTGACAGATCTCCGTATAACCGGGAGAAGTCCCCACATGGACGGGAGAGGTCCCCATATCCGTATAACCGGGAGAAATCCCCCCATGGTCGGGAGAGGTCGCCATATACAAGGAACTGGGACAGAAGTCGTCAGCCTGATCATAAATTGAGAAGTCCAACTCGTTCTGAGCAGTCGCCACCTGATCGCAGTCGGCGACACGATCCTAAGGATAGTACCACAAATTTGTCAGAAGCATCTCCCCTTGATCAGGCTAGGAAAGACGGTCGACGTGATTCAGGTTGTAAAACCTTACCAAGTGAAAAACATGATTCCCAAAATTGTTGTAAGGATCATGAAGATAAGCAGACTCAGAGGGATTCAAACTGTTCAAGTACCGAATCTCAGAATGAAAAAAGTGTGCAAGAGTCCATTAAGTCTGTTGAGAAAGACATCTGCAATCAACCCTTAAACGAACACCGGAGTTGCAGCCCAACCCTTACCCACAAAGAATCTCCTCAATCCGAGCCCCCTCCTGAGGAGATGCCTTCTATGGAGGAGGATATGGACATTTGTGATACCCCTCCACATGTCCCTGTGGTGACAGATTTGTCTTCAGGGAAATGGTATTACCTGGACTATGGTGGTGTGGAAAATGGGCCTGCTAAATTGTGCGACATCAAGGTCCTTGTGGAGGAAGGTGTACTAATGTCAGATCACTTTATCAAGCACATAGATAGTGACAGGTGGTTAACAGTTGAAAATGCCGCGTCACCTTTGGCACCTCCGAACTTTCCTTCAATTGTGTCGGATAGCATAACTCAACTGGTAAATCCCCCAGAAGCTCCTGGTAATATCTTGTCAGATACAGCTGATATTTTTCAATCCGCTCATGAGAATCACCAGGAAATGCTAACCTCCTCGCCGCCTCCACTAGTGTGCCCCATTGACAGTTTGCGTTCGTCTGAACTTTTGGAGGACTTCCACATTGATGAAAGAGTTAAACATCTCTTGAAGGGTTATGATGTCACTCCTGAGATGGAACCTGAGGCAATAAAAGAAGTGTTGCTAATGAATTTTGAAAATGCAAGAGGGGAGGGATCGAGAGATTATGAAGGTTTTCCTTGGAATGCTTCCTGCCTCGGGGAAGATTATGATTCAAGTACTGATTTAGCATCTAGAGATTCTGAGTCTCAGTTAAGTATGTCATCTGATAAGGATAATGGACTAGGCTTTGGTATTTCTAGTGACTGGTTTTCCACCCGTTGGTCATGTAAAGGTGGTGACTGGAAGAGGAATGATGATTCCATGGATAGATATTCTAGAAAGAAACTTGTGCTAAATAATGGTTTTTCGTTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGAATTGTATTTTCCTTCTCAAAACAAGAGGCTTGATCTTCCTCTGTGGGCTTTCTGTGCTGATGAGCGGGATGAAAGCAGTGCTGCAGGTAGATCAGTTCAAAGTAAGCCTGTTTCTGTGAGAGGAGTGAAAGGCAATGTTCTTTCAGTGGTCAGGATAAATGCATGTGTAGTAAAGGACCAGGGGTCATTGGTCTCTGAGTCACGCCACAAGACGCGGGGCAAGGAAAGACATCATTCTAGATCAAATCGGCCTTTCTCTGCAACCAGTGATAGCAAGAGATCATCAACGGAACAGGATTCCCAGTTCAAAGCTTTTAGTGATCAAGGTTCTTACAGGATCATGGAATTCCTTAACACTCCTAAAGACCATCTCTGTACTATCCATGAGTTGCAATTACATTTGGGTGACTGGTATTATTATGATGGTTCTGGGCGTGAAAGGGGCCCCTCATCATTTTCAGAACTACAGTATTTAGTAGATCAAGGCATCATAAAAAAACATAGCAGTGTGTTCAGGAAAAGTGACAAACTCTGGGTTCCTATCACCTCTGCAACAGAAACATCTGATGGCAGTTTCCCGATCCAACAAGAAAGCAGTTCAATATCTGGTTTTTCATCAAAGCAAACTCAGGCATGTGGTGAACCTTACACAAATTCAAGTTTGTTTAACAGCTTGCATCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAGCTGGTGATGAAATCATATAAGAGCCGAGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAATTGAAAAACAACTATATTGGAAATCAGAAGGGGATGCGCATGCTGCCAAGAGAGCCCGGCTTCTTGTTGATGATAGTGAAGATGACAGTGATTTGGAAGATGGTGATTTTACTATCGAGAAGGATGAATCTAGTTTTGAGGATCTATGTGGTGATGCTACTTTTCCTGAAGATGAAATTAGTGTTACTGATTCTCAAATGGGAAGCTGGGACAATTTGGATGGCCATGTGCTAGCACGGATTTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTTGCTTCATTGACTTGCAAGCGCTGGAGAGCTTCTGTAAGGTTTTATAAAGAAGTGTCAATGCAGGTCAATTTGTCATTCTTGGGTCATTCATGCACTGATGCCATGTTGTGGAACATTTTGAATGGATACGAGAAAGAGAAGATCAATTCTATAATTCTAAGGGGTTGTGTTAATATTACGGCTGAGATGCTTGAGAAAGTTCTTCTTTCATTTCCTGGTTTATTTACAGTAGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCTTAAATTTGCGAATGTGAAATGGATCAAGAGCCGAAGTTCACACTTGACTAAAATTTCTGAGGATCCTCACAAAATTAGAAGTCTTAAACATATTACAGAGCTAACCTCATCTGTTTCCAAATCCAGCAGTATAGGTATAGATGATTTTGGGCAATTGAAGGACTATTTTGATAGTGTGGATAAGAGAGATACCAAGCAATTATTCCGTCAAAACTTGTACAAGCGATCAAAACTATATGATGCTAGAAAGTCCTCCTCCATTCTATCGAGGGATGCTCGTACAAGACGTTGGGCAATCAAGAAAACTGAAAGCGGTTATAAGAGGATGGAGGAGTTCCTTGCTTCCAGACTCAGGGAAATTATGAAGACAAACTCTTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAGTGGTTATTACAGTAGCCGTGGGTTGAATTCTGTGAAAGACGACATAAGTAGAATGTGTCGTGATGCCATAAAAGTGAAGAATCGGGGTGATGCTAGTTACATGAATCATATTATCACACTGTTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCTAAATCTGTGCATGACAGAAATCTACTGAAATCGTGGGACAATGACTTGCCTGCAGTGTCCTGCTCTACTTTGTCAAAGTATAAGAAGAATAGGTTAGTGAATGAAAGGAAGTATAGGAGTAATGGGACACATGGTTTGGATAATGTGGAATATACCTCTGATCGAGAAATTAAGAGGCGATTATCAAAGTTGAACAAAAAATCTATGGACTCAGAGAGTGAAACATCTGATGATGATCTTGATATGTCTTATGAAGATGGAAAGAGTGACAGTGATACTACAACCTCTGACACTGAAAGTGAACGAGAAGTACATTCAGAAAGTCTGATTAGGGATTCAAGAGGGGAAGGATACTTGACATCTGAGGAAGAGTTGGATTTTATAACTGATGATCGAGAGTGGGGTGCACGCATGACAAAAGCAAGTTTGGTTCCTCCAGTTACCAGGAAATATAAAGTCATTGATCAATATTGCATTGTAGCCGATGAGGAGGATGTGCGAAGGAAGATGAGGGTTTCATTACCAGACGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTGAAAGATTACAAACCTAGAAAGCAGCTAGGATATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTTTACACACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGGCTCTGCCAGAGAAGCATTTGTTTATAGAAGATACACTCCTTCGAACATTGAATAAGCAAGGTAGAAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCGTTGCGGCCTGTTGTTGAAGATATTAAAAGACAAGCTGAGGAGGATTGTGATGCAAGAATGGTTAAAATGTGTCAAGGTATTCTAAAGGCCATGGACAGTCGTCCAGAAGACAAATACGTAGCTTATAGGAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGATTTGCAGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAAAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTACAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATATGGCTAATTATGCCAGTCGAATATGTCATTCGTGCAGACCTAACTGTGAAGCCAAGGTGACTGCCGTTGATGGTCAATATCAAATTGGTATTTATAGTGTTCGTAAAATTCAAAATGGTGAGGAGATCACTTTTGACTACAATTCTGTAACGGAGAGCAAGGAGGAGTATGAAGCATCGGTTTGTTTGTGTGGAAGCCAAGTATGCCGTGGGAGCTATCTGAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTTGATCGGCATTATTTGATGCTAGAAGCTTGTGAATTAAATTCTGTGTCTGAAGAGGACTATAATGACCTTGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCGGATTGGCTTGTTGCTTATGCGGCTCGCCTTGTGAGATTTATCAATTTTGAACGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATCTGGAAGAAAAGAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCCGAGGGTGTTTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTCATGAGATGTATTTTTGGCGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAACTGTTTCCTTCCTCTGGAAAGGCGAGGGTTCATTTGTTGAGGAGCTTCTTAAGTGCATCGCTCCTCATATTGAAGAAGAGATCTTGAAAGATCTCAAGCTTAAAATTCATGCTCACGATCCTTCACATTCAGTAGATATTCAAAAAGAGCTTCGCAAATCTTTGTTATGGTTGAGGGATGAGGTCCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGGATACAGAATTATCAAGCGATTACATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTCGGGAGCAGAATTTCAGGAGTACCGAAAGATATATGGTGAAAATTATTGTTTAGGACAGCTGATATTTTGGCATAACCAGAGTAATGCTGATCCAGATCGGAGCCTGGCTAGAGCTAGCAGGGGTTGCTTGTCTTTACCAGATACAAGTTCCTTTTATGCCAAGGCGCAGAAGCCCTCTCGACATTGTGTTTATGGTCCAAGGACCGTCAGATCTATGCTTGCTAGAATGGAGAAGCAGCCGCAGAGATCTTGGCCCAAAGACCGGATATGGTCGTTCAAAAGTTTTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAGTAAATAACTCTGCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAAGCCATGTGGGACCGTTAA 7164 0.4303 MGDGGVPCMPLQYIMERLPSSEKTVVCGGKSGNGFNSKLFKFAGNERRKMKARKSELGLDRVSKRSSNDVENGGEVEKQQEKVQKEEVEEGELGTLKWPRTDLENGEFVPEMPPPPPLRKGEIENGEIVSEKWKGRELEKGEIASGKWRKEDVERGEIVPEKGGRKGEAERGEYGSWRGVNDEIEKGEFIPDRWYKGDYDNSRIRRYHSGRDKGWKIERERESTPSSGRYSGDDFFRKKDLNIRGSQHPKSSPRWEGGQQRNVRISSKIVDDEKNVHSNGKDHARDYTSGSRLKRLGNDSDSYERKHSADYAGLKSRRLSDDSCRQVYSENYSRRSVERSYRTNNATKLSADKYSSRNHESSLSIRQVYDRHGRSPGHSERSPRDRGRYYDHRDRTPVRRSPCGRDRSPYNREKSPHGRERSPYPYNREKSPHGRERSPYTRNWDRSRQPDHKLRSPTRSEQSPPDRSRRHDPKDSTTNLSEASPLDQARKDGRRDSGCKTLPSEKHDSQNCCKDHEDKQTQRDSNCSSTESQNEKSVQESIKSVEKDICNQPLNEHRSCSPTLTHKESPQSEPPPEEMPSMEEDMDICDTPPHVPVVTDLSSGKWYYLDYGGVENGPAKLCDIKVLVEEGVLMSDHFIKHIDSDRWLTVENAASPLAPPNFPSIVSDSITQLVNPPEAPGNILSDTADIFQSAHENHQEMLTSSPPPLVCPIDSLRSSELLEDFHIDERVKHLLKGYDVTPEMEPEAIKEVLLMNFENARGEGSRDYEGFPWNASCLGEDYDSSTDLASRDSESQLSMSSDKDNGLGFGISSDWFSTRWSCKGGDWKRNDDSMDRYSRKKLVLNNGFSLCQMPKSGCEDPRWPQKDELYFPSQNKRLDLPLWAFCADERDESSAAGRSVQSKPVSVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRGKERHHSRSNRPFSATSDSKRSSTEQDSQFKAFSDQGSYRIMEFLNTPKDHLCTIHELQLHLGDWYYYDGSGRERGPSSFSELQYLVDQGIIKKHSSVFRKSDKLWVPITSATETSDGSFPIQQESSSISGFSSKQTQACGEPYTNSSLFNSLHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQLYWKSEGDAHAAKRARLLVDDSEDDSDLEDGDFTIEKDESSFEDLCGDATFPEDEISVTDSQMGSWDNLDGHVLARIFHFLKSDLKSLVFASLTCKRWRASVRFYKEVSMQVNLSFLGHSCTDAMLWNILNGYEKEKINSIILRGCVNITAEMLEKVLLSFPGLFTVDIRGCNQFGELTLKFANVKWIKSRSSHLTKISEDPHKIRSLKHITELTSSVSKSSSIGIDDFGQLKDYFDSVDKRDTKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKTESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEAKMKSGYYSSRGLNSVKDDISRMCRDAIKVKNRGDASYMNHIITLFIQLATRLEESSKSVHDRNLLKSWDNDLPAVSCSTLSKYKKNRLVNERKYRSNGTHGLDNVEYTSDREIKRRLSKLNKKSMDSESETSDDDLDMSYEDGKSDSDTTTSDTESEREVHSESLIRDSRGEGYLTSEEELDFITDDREWGARMTKASLVPPVTRKYKVIDQYCIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGYEVIEQEVYGIDPFTHNLLLDSMPEELDWALPEKHLFIEDTLLRTLNKQGRNFTGTGSTPMSYPLRPVVEDIKRQAEEDCDARMVKMCQGILKAMDSRPEDKYVAYRKGLGVVCNKEEGFAEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQNGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEELLKCIAPHIEEEILKDLKLKIHAHDPSHSVDIQKELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQNYQAITSPPVYISPLDLGPKYTNKSGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDTSSFYAKAQKPSRHCVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKSFPKFFGSPMLDAVVNNSALDREMVHWLKHRPAIFQAMWDR 2387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03041 2387 MobiDBLite consensus disorder prediction 205 245 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 246 265 - -
Viun5g03041 2387 Gene3D SET domain 1800 1988 IPR046341 -
Viun5g03041 2387 Gene3D Ribonuclease Inhibitor 1202 1389 IPR032675 -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 147 172 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 1602 1632 - -
Viun5g03041 2387 CDD F-box_SF 1209 1242 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 931 971 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 205 584 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 50 125 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 525 570 - -
Viun5g03041 2387 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1968 2387 IPR045606 -
Viun5g03041 2387 SUPERFAMILY SET domain 1832 1980 IPR046341 -
Viun5g03041 2387 SUPERFAMILY F-box domain 1204 1244 IPR036047 GO:0005515
Viun5g03041 2387 MobiDBLite consensus disorder prediction 487 524 - -
Viun5g03041 2387 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 428 2387 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 364 477 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 266 324 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 1578 1632 - -
Viun5g03041 2387 SMART set_7 1823 1963 IPR001214 GO:0005515
Viun5g03041 2387 Pfam SET domain 1899 1957 IPR001214 GO:0005515
Viun5g03041 2387 ProSiteProfiles SET domain profile. 1822 1957 IPR001214 GO:0005515
Viun5g03041 2387 MobiDBLite consensus disorder prediction 952 971 - -
Viun5g03041 2387 CDD SET_SETD2-like 1831 1979 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 325 363 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 50 97 - -
Viun5g03041 2387 MobiDBLite consensus disorder prediction 784 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03041 Viun-Chr5 41618590 41634256 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun5g03041 SET 8.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03041 K22748 - gmx:100776205 4165.15