Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03029 ATGAGAAGTGAAGAGGTTGTGTTGTCGTTCTCCTTTCTTTTTCTCTGGCTGTCGATATGCTTCGAAATATGTTATGGAAGAGATACTCTGAAGGTTAACCAGAAGATAACCCAGGACTCCGAAGGAAACCTTTTTTCATCAAACGCCACATTTGAGCTGGGCTTCTTCTCTCCCGGTGAGGAAAGTGGAGAGAAAAGATACCTGGGGATATGGTATCACGGCTTGGAACCACAAACAGTGGTGTGGGTTGCCAACAGAGATCATCCCGTTGCAGATTCCAGTGGAGTTTTTCGAATTGCGGAGGATGGAAATCTCGTGGTAGAAGATGCATCATCCAAAACCCACTGGTCCTCCAAACTTGAAGCTAACTCGTCCGCCAACAAAACACTGAAGCTCCTAGATTCGGGGAATCTAGTACTAATACAGGATGACTCTGAAACCACATATCTGTGGCAAAGCTTCCAAAACCCAACAGACACGTTTCTTCCCGGCATGAAAATGGATGCGACTTTGTCGTTGACTTCTTGGAGAGACTCCGCTGACCCAGCACCTGGGAACTTCACTTTCAAAATGACTCAAAAGGCTGAGAAACAACGCTTCGTTGTGCAATATCATTCACACATCTACTGGGCACCTTATGAACTTGGCACAGAAGCGGCTTCCCAGAAGGTATTTGATTTGTTGCACAACACCACCTGGAATAGTACAACGTACAAATATTCTAACAAAACAGTCTTCGTATCAAAGCCTTACATGTACAATAAGTCAAGGCTGGTAATGAGTTATAGCGGGGAGATAGTGTTTCTGAAGTGGGACGAGAAACCATTACAATGGAATAAGAAATGGTTTGGACCAGAGGACAAGTGTGACATATATGATTATTGCGGGAGCTTCGGCATATGTAACAGAGATAACCTTCGGTGCAAATGTTTGCCAGGATTCAGTTCTGTTCAAGGTTTGCATTCTGATCGAGAATCGGAGTCCCAAGGATGTGAGAGAAAATCAAAGCCGTGTAACAGTACGAACGAGGACGTGTGGTTCCTGAACTTAACCAATATAAAAGTGGGGAACTCAGACCAAGAAATTTATACTCAAACAGAAGCAGAATGTCAATCCATGTGCATCAACATGTGTCCCGAACCACAGTGCCAGGCATATTCATTTAATACTTCTACGTATGGTGACCGTAGTTCATACTCCTGCTATATCTGGACGGAGCCTTTAACTTCTCTTGTTGAGAACAACCCGCGCGGTCGTGATCTTTCTATCTTGGTTAAGAAATCAGACATAGCACCAACTGCTAAATCCTGTGAACCTTGCGGCACATATGCGATTCCTTATCCCCTGAGCACTGGGCCAAACTGCGGCGACCCCATGTACCACAACTTCAATTGCAACAAATCCTCCGGCATAGTTAGCTTCATGATGCCCGGAGGAAAATCATACCCAGTTACTTGGATCGATGAAGCTACCAGAATGTTTTCCATTCAAACAGATTATTCATATTTCTGTGGTTCCAAAAATCAGAATAATACTCCTAAACCTCCATTCCGTTTAGCTGACTCAAAGTGTTCCAAAAATGTTGGAATGGTTAATATCAGTTGGGAAGCAGCACCAGAACCTCCCTGTGGGAAGCTCATAGACTGTGAGAACTGGCTCCATTCGACATGCACGGAAACAAGTGAAGGAGATCACAGGTGCCATTGCAATTCGCACTATAAGTGGGATACCTCAATTATGATGTGTGCCCAAGAAAAGCATTCAACCATCCCAAAGACGACTTTAGTAATTTTTACTATCATGGTGATTCTGGGATGTATAATAGCATTTCTCATTGTGTGGAGAAAGAGAAAAGCTCATAAGCTTGATAGTGCAGATGAAGCAAGTAGTCGAATTCAGGAGAGCTTGCACGAGAGTGAAAGACATGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAACGACATTGAAGGCATTGAAGTGCCCTGTTATACTTTTGCAAGCATTCTATCAGCTACAGATAATTTCTCAGATTCTAACAAGCTTGGAAGAGGAGGTTACGGACCTGTATACAAGGGAACGTTTTATGGAGGTCATGATATAGCTGTAAAGAGACTTTCAAATGTTTCCACTCAAGGGTTACAAGAATTCAAAAATGAGGTTATTCTGATTGCCAAACTTCAACACCGGAACCTTGTTAGACTAAGGGGCTATTGCATTAAAGGAGATGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCCTTCATATTTGACCGAACACGAACTTTACTTCTGGATTGGCCAATGCGATTCAAGATAATTGTAGGCATTGCGCGAGGCATGCTCTATCTTCACCAAGACTCCAGATTGAGAGTGATTCACAGAGATTTAAAAACTAGCAACATTCTTCTAGACGAAGAGATGAATCCAAAGATTTCAGACTTTGGTCTAGCCAAAATATTTGGGGGAAAAGAAACTGAAGCAAGTACAGAGAGAGTAGTGGGAACCTATGGATATATGGCTCCAGAGTATGCATTGGATGGACTTTTTTCAATCAAATCTGATGTTTTCAGTTTTGGAGTAATCCTTCTGGAGATCCTCAGTGGAAAAAGGAACACAGGATTTTATGAATCCAATCAAATTTCTAGCCTTTTGGGTTATGCATGGAAGTTGTGGACAGAGAATAGGCTTCTGGATTTAATGGATTCATGCATTGGTGAAACATGCAACCAAAATCAATTCATCAAGTGTGCAATTATTGGGCTATTATGCATTCAAGATGAACCAATTGATCGACCCAATATGTCAAATGTTTTGTTCATGCTTGACAGAGATACAACAACTATGCCATTGCCAATTCCCACACAACCAACCTTTTTTGTCAACAAATTATTATCAGAGATAACACATGTATTAAGAAGGTTTGTATTAGCAATGAGAAGTGAAGGGGTTGTGTTGCCGTTCTCCTTTCTTCTTCTGTGGCTGCCGCTATGGTTGGAAATATGTTTGGGTGGAGATACTCTGAAGGCTAAGCAGAACATAACTCAGGACTCCAAAGGAAACCTTGTTTCATCAAACGACACATTTGAGCTGGGCTTCTTTTCTCCCGGTGGGGAAAGTGGAGGGAAATATCTGGGGATATGGTATCACGGCTTGGAACCACAAACAGTGGTGTGGGTTGCCAACAGAGATCATCCCGTTGCAGATTCCAGTGGAGTTTTTCGAATTGCGGAGGATGGAAATCTCGTGGTAGAACATGCATCATCCAAAACCCACTGGTCCTCTGAACTTGGACCATCCTCATCCACAAACAGAACATTGAAGCTCCTAGATTCTGGGAATCTTGTACTAGTAGAGGATCACTCTGAAACGACTTACCTGTGGCAAAGCTTCCAAAACCCAACAGACACTTTTCTTCCCGGCATGAAAATGGATGCGACTTTGTCGTTGACTTCTTGGAGAGACTCCGCTAACCCAGCACCTGGGGACTTCACCTTCAAGCTGGATCCTAGTGGAACCTTGGTGGTGTTAAAACAATCGCAACTTTACTGGACAGAGTCACTTGATGGATCCGATACAAAGATCTATGATTTCTTGAGCTTGATGAACACTTCATGGACCAGGAATTCAAGCTTCTTGATGTTTCAACAAAAACCTCATCACATAAACAAAAAATCAAGGCTAATAATGAATTCTAACGGGGAGATACAGTTTATGAAGTGGGACGAGGACGACAGGCAATGGGATAAACGGTGGTGGGAACCAGATGGCGCGTGCGACGTATATGGCAATTGCGGGAGCTTCGGCATATGCAAAGAAAATAATTTGATTCCGAAGTATTGCAAATGTTTGCCAGGATTCAGACCCAGGGATGAAAAAAGCCCTGGCGAAGGGTGTATCAGAAAATCAACGTCTTGTAGTGACACGAATGTGACGTTCCTGAACTTAACCAACATAAAAGTGGGTGGGTCAGATGAACAGATTCATTCGGTAACAGAAGCAGAATGTGAATCCTTGTGCCGTAACCGTAGCATTAGCAAGTGTTCTCAGACCCAGTGCCAGGCATATTCATATTCATATTCATATAGTTCTGAAAGGGAGCTTGATGGAGATGGTTATTATAACTCCACATGCGAGATCTGGACGGGAAATTTATCAACTCGTGTAGGTGGTGGTCGCAATCTTTCTGTCCTGGTTAAGAGATCAGATATAGAAGCAACTGCAAAATCGTGTGAACCTTGTGGTGCAAACGAGATTCCTTATCCGCTGAGCACTGGGCCAAACTGTGGAGACCCCACGTACAACAACTTCAGTTGTAATGAATCGACGGGCGACGTTAGCTTCAGGATGCCCGGAGGAAAATCATACCTAGTTACTTGGATCGATGAAGATACCAGAATGTTTTACATTGAAACAGATGATTCATATTCTTGTGGTTCCAGAAATCTAAATAACACTCTTAAATCTCCATTCAGTGTTGTAGCTGACTCAGAGTGTTCCATAAAAGATGGAGTGATTAAAATGAGTTGGGAAGCAGCACCAGAACCTCCCTGTAAGAAGCCCACAGACTGCGAGAACTGGCTCCATTCGACATGCACTGGAACAAGTAAAGGAGATCGCAGGTGCCATTGCAATCCTCACTATAGCTGGAATAACTCAATTATGATATGTGCCAAAGAAAAGCATTCAACAGACTCACTGGCGATCACTTTTGTAATTTTTACTATCATGGTGATTCTGGGATGTATAATAGCATTTCTCATTGTGTGGAGAAAGAGAAAAGCTCATAAGCTTGATAGTGCAGATGAAGCAAGTAGTCGAATTCAGGAGAGCTTGCACGAGAGTGAAAGACATGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAACGACATTGAAGGCATTGAAGTGCCCTGTTATACTTTTGCAAGCATTCTATCAGCTACAGATAATTTCTCAGATTCTAACAAGCTTGGAAAAGGAGGTTACGGACCTGTATACAAGGGAACGTTTTATGGAGGTCATGATATAGCTGTAAAGAGACTTTCAAATGTTTCCACTCAAGGGTTACAAGAATTCAAAAATGAGGTTATTCTGATTGCCAAACTTCAACACCGGAACCTTGTTAGACTAAGGGGCTATTGCATTAAAGGAGATGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCGTTCATATTTGATCGAACACGAACTTTACTTCTGGATTGGCCAATGCGATTCAAGATAATTGTAGGCATAGCGCGAGGCATGCTCTATCTTCACCAAGACTCCAGATTGAGAGTGATTCACAGAGATTTAAAAACTAGCAACATTCTTTTAGATGAGGAGATGAATCCAAAGATATCAGACTTTGGTCTAGCCAAAATATTTGGGGAAAAAGAAACTGAAGCAAGTACAGAGAGAGTAGTGGGAACCTATGGATATATGGCTCCAGAGTATGCATTGGATGGACTTTTTTCAATCAAATCTGATGTTTTCAGCTTTGGAGTAATCCTTCTAGAGATCCTCAGTGGAAAAAGGAACACAGGATTTTATGAATCCAATCAAATTTCTAGCCTTTTGGGTTATGCATGGAAGTTGTGGACAGAGAATAGGCTTCTGGATTTAATGGATTCATGCATTGGTGAAACATGCAACCAAAATCAATTCATCAAGTGTGCAATTATTGGGCTATTATGCATTCAAGATGAACCAATTGATCGACCCACTATGTCAAATGTTTTGTTCATGCTTGACAGAGATACAACAACCATGCCATTGCCAATTCCCACACAACCAACCTTTTTTGTCAACAAGCGTTTTTCTAGCTCAGCTTCCTCTTCTAGCAAACCAGAGATAGGTCTGCAATTTGACACCAGTTATCAACAAGGTCGATAG 5934 0.4193 MRSEEVVLSFSFLFLWLSICFEICYGRDTLKVNQKITQDSEGNLFSSNATFELGFFSPGEESGEKRYLGIWYHGLEPQTVVWVANRDHPVADSSGVFRIAEDGNLVVEDASSKTHWSSKLEANSSANKTLKLLDSGNLVLIQDDSETTYLWQSFQNPTDTFLPGMKMDATLSLTSWRDSADPAPGNFTFKMTQKAEKQRFVVQYHSHIYWAPYELGTEAASQKVFDLLHNTTWNSTTYKYSNKTVFVSKPYMYNKSRLVMSYSGEIVFLKWDEKPLQWNKKWFGPEDKCDIYDYCGSFGICNRDNLRCKCLPGFSSVQGLHSDRESESQGCERKSKPCNSTNEDVWFLNLTNIKVGNSDQEIYTQTEAECQSMCINMCPEPQCQAYSFNTSTYGDRSSYSCYIWTEPLTSLVENNPRGRDLSILVKKSDIAPTAKSCEPCGTYAIPYPLSTGPNCGDPMYHNFNCNKSSGIVSFMMPGGKSYPVTWIDEATRMFSIQTDYSYFCGSKNQNNTPKPPFRLADSKCSKNVGMVNISWEAAPEPPCGKLIDCENWLHSTCTETSEGDHRCHCNSHYKWDTSIMMCAQEKHSTIPKTTLVIFTIMVILGCIIAFLIVWRKRKAHKLDSADEASSRIQESLHESERHVKGLIGLGSLEENDIEGIEVPCYTFASILSATDNFSDSNKLGRGGYGPVYKGTFYGGHDIAVKRLSNVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPMRFKIIVGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGLFSIKSDVFSFGVILLEILSGKRNTGFYESNQISSLLGYAWKLWTENRLLDLMDSCIGETCNQNQFIKCAIIGLLCIQDEPIDRPNMSNVLFMLDRDTTTMPLPIPTQPTFFVNKLLSEITHVLRRFVLAMRSEGVVLPFSFLLLWLPLWLEICLGGDTLKAKQNITQDSKGNLVSSNDTFELGFFSPGGESGGKYLGIWYHGLEPQTVVWVANRDHPVADSSGVFRIAEDGNLVVEHASSKTHWSSELGPSSSTNRTLKLLDSGNLVLVEDHSETTYLWQSFQNPTDTFLPGMKMDATLSLTSWRDSANPAPGDFTFKLDPSGTLVVLKQSQLYWTESLDGSDTKIYDFLSLMNTSWTRNSSFLMFQQKPHHINKKSRLIMNSNGEIQFMKWDEDDRQWDKRWWEPDGACDVYGNCGSFGICKENNLIPKYCKCLPGFRPRDEKSPGEGCIRKSTSCSDTNVTFLNLTNIKVGGSDEQIHSVTEAECESLCRNRSISKCSQTQCQAYSYSYSYSSERELDGDGYYNSTCEIWTGNLSTRVGGGRNLSVLVKRSDIEATAKSCEPCGANEIPYPLSTGPNCGDPTYNNFSCNESTGDVSFRMPGGKSYLVTWIDEDTRMFYIETDDSYSCGSRNLNNTLKSPFSVVADSECSIKDGVIKMSWEAAPEPPCKKPTDCENWLHSTCTGTSKGDRRCHCNPHYSWNNSIMICAKEKHSTDSLAITFVIFTIMVILGCIIAFLIVWRKRKAHKLDSADEASSRIQESLHESERHVKGLIGLGSLEENDIEGIEVPCYTFASILSATDNFSDSNKLGKGGYGPVYKGTFYGGHDIAVKRLSNVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPMRFKIIVGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGEKETEASTERVVGTYGYMAPEYALDGLFSIKSDVFSFGVILLEILSGKRNTGFYESNQISSLLGYAWKLWTENRLLDLMDSCIGETCNQNQFIKCAIIGLLCIQDEPIDRPTMSNVLFMLDRDTTTMPLPIPTQPTFFVNKRFSSSASSSSKPEIGLQFDTSYQQGR 1977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03029 1977 Pfam D-mannose binding lectin 1062 1153 IPR001480 -
Viun5g03029 1977 Pfam D-mannose binding lectin 79 170 IPR001480 -
Viun5g03029 1977 SMART blect_4 1021 1140 IPR001480 -
Viun5g03029 1977 SMART blect_4 29 157 IPR001480 -
Viun5g03029 1977 CDD PAN_AP_plant 338 425 - -
Viun5g03029 1977 CDD B_lectin 1028 1140 IPR001480 -
Viun5g03029 1977 ProSiteProfiles Protein kinase domain profile. 677 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03029 1977 ProSiteProfiles Protein kinase domain profile. 1659 1947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03029 1977 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 181 IPR036426 -
Viun5g03029 1977 Gene3D Phosphorylase Kinase; domain 1 1633 1734 - -
Viun5g03029 1977 Gene3D Phosphorylase Kinase; domain 1 651 752 - -
Viun5g03029 1977 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1626 1734 - -
Viun5g03029 1977 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 121 975 - -
Viun5g03029 1977 ProSiteProfiles PAN/Apple domain profile. 338 428 IPR003609 -
Viun5g03029 1977 SUPERFAMILY alpha-D-mannose-specific plant lectins 1050 1191 IPR036426 -
Viun5g03029 1977 FunFam Os04g0303100 protein 1054 1189 - -
Viun5g03029 1977 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1735 1938 - -
Viun5g03029 1977 FunFam Receptor-like serine/threonine-protein kinase SD1-8 1006 1137 - -
Viun5g03029 1977 Gene3D Transferase(Phosphotransferase) domain 1 1735 1937 - -
Viun5g03029 1977 Gene3D Transferase(Phosphotransferase) domain 1 753 955 - -
Viun5g03029 1977 CDD B_lectin 44 157 IPR001480 -
Viun5g03029 1977 FunFam Os04g0303100 protein 71 209 - -
Viun5g03029 1977 FunFam Receptor-like serine/threonine-protein kinase SD1-8 22 154 - -
Viun5g03029 1977 Pfam Protein tyrosine and serine/threonine kinase 1662 1926 IPR001245 GO:0004672|GO:0006468
Viun5g03029 1977 Pfam Protein tyrosine and serine/threonine kinase 680 944 IPR001245 GO:0004672|GO:0006468
Viun5g03029 1977 CDD STKc_IRAK 683 950 - -
Viun5g03029 1977 SUPERFAMILY Protein kinase-like (PK-like) 660 948 IPR011009 -
Viun5g03029 1977 Pfam PAN domain 355 410 IPR003609 -
Viun5g03029 1977 SMART serkin_6 1659 1903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03029 1977 SMART serkin_6 677 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03029 1977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Viun5g03029 1977 MobiDBLite consensus disorder prediction 1955 1977 - -
Viun5g03029 1977 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 644 752 - -
Viun5g03029 1977 Gene3D - 23 155 IPR036426 -
Viun5g03029 1977 Gene3D - 1008 1138 IPR036426 -
Viun5g03029 1977 SMART ntp_6 342 425 IPR003609 -
Viun5g03029 1977 SMART ntp_6 1314 1408 IPR003609 -
Viun5g03029 1977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1780 1792 IPR008271 GO:0004672|GO:0006468
Viun5g03029 1977 ProSiteProfiles PAN/Apple domain profile. 1312 1417 IPR003609 -
Viun5g03029 1977 CDD STKc_IRAK 1665 1932 - -
Viun5g03029 1977 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Viun5g03029 1977 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 753 956 - -
Viun5g03029 1977 SUPERFAMILY Protein kinase-like (PK-like) 1642 1930 IPR011009 -
Viun5g03029 1977 ProSiteProfiles Bulb-type lectin domain profile. 1013 1136 IPR001480 -
Viun5g03029 1977 Pfam S-locus glycoprotein domain 234 316 IPR000858 GO:0048544
Viun5g03029 1977 Pfam S-locus glycoprotein domain 1213 1296 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03029 Viun-Chr5 41436166 41453422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03029 667 967 Receptor kinase-like Gene Family AT4G23140 57.655 1.19e-117 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g03029 PK_Tyr_Ser-Thr 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03029 - - vun:114184726 4027.63