Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03018 ATGACAAACCCAAGGTTCTGTCTTTCTATTCTGGTTCTGTTCTTTTCTCTGTACACTCATCCTTCTCTTGCTGCTCTCACCACCCTTTCAGCTGATAAAAAGCTCACTGGTGATCAAACTCTCGTCTCCGAAGGTGGGGTCTTTGAACTGGGTTTCTTCAAGCCAGGTAATTCCTCTAACTACTATATAGGCATATGGTACAAAAAGGTCACCCAAAAAACAATAGTTTGGGTTGCAAACAGAGACAACCATGTCCCTGATAAGAACACTGCCACGTTAACAATATCAGATAGTAATTTGGTTCTCTTAGATGGGTCTTCTAATCAAGTTTGGTCAACAAACACCAGTTCTCCTAGGTCAGGTTCTGTTGTGGAAGCTGTTTTACTAAATTCCGGGAATCTTGTGTTAAGAGACAGAGCTGATGATAATGCTTCGGAGCCTTCGTGGCAGAGTTTTGATCACCCCACGGACACGTTCCTTCCGGGTGGAAAAATTAAACTCGACCATAAAACAAAGAAACCACAATACCTTACTTCGTGGAAGAACACGGAAGATCCTGCTACGGGTCTCTTCTCTCTGGAACTAGACCCTGAAGGCTCCACTTCTTATTTGATTACTCGGAACAAGACTGAACAGTATTGGACAAGTGGCGCTTGGAATGGACATATTTTCAGTTTGGTTCCAGAGATGAGGTTGAATTATATCTTCAATTTCTCGTTTGTGTCAAACGAGAACGAGAGCTATTTCACCTACTCCTTGTATAACTCTTCCATTATATCTCGGTTATTGATAGATGTCACGGGACAGATCAAGCAAATGACGTGGTTGGAGAATGCTCAGCAGTGGAACTTGTTTTGGACACAGCCGAGAAAACAATGTGACGTATATGCCTTTTGCGGTGCGTTTGGGAGTTGCTCCGAGTTCTCAACGATGGGGCCTTGTAATTGCTTGAAGGGTTTTGAGCCAAAGTCACCGTCTGATTGGAATCTGGGGGATTACTCAGGAGGGTGCCAGAGGAAAGAAAAGCTGCAATGCGAGAATTCGAATGCCTCCAACAGAAATAAGGACGGGTTCCTAGCAATTCCCAACGTGGTATTACCTAAAGGTGCACAATCTGTGGGATTAGGGAATGCAGGAGAATGTGAATCAATCTGCTTGAGCATCTGTTCCTGTGCAGCTTATGCATATGACAGTAACGGGTGTTCAATTTGGGTCGGCAACCTTCTGAATGTGGAACAGTTGTCTTCAGATGATAGTAGCGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTCATCATGATGATAAAAGCAGCAAGGGGACGATTATCGGTGTGGTTGTGGGAGTGGTTGCTGGCATTGGGATTCTCTTGGCCATTCTTTGGCGAAGGAAGAGAATGGTGGCATCAAGAAAGGCTGCAAAGGGTTCGCTGGTGGCATATGGGTACAGAGATTTGCAAGCTGCAACGAGGAATTTCTCTGAGAAATTGGGAGGTGGAGGGTTTGGTTCTGTTTTCAAAGGAACGTTGGATGATTCCAGTGTGGTAGCAGTGAAAAAGTTGGAAAGTTTTGGCCAAAGAGAGAAACAGTTCCAGACAGAAGTTCGGACAATAGGGACAATACAACATGTTAATCTTGTCAGGCTCCATGGATTCTGCTCTGAAGGAACCAAAAGGCTGCTAGTTTATGAATACATGCCAAATGGCTCCTTGGATTTCCACTTGTTCCAAAACAAGAACTTCGTGGTATTGGACTGGAAAACGAGATACCAAATTGCTTTGGGAATAGCAAGGGGATTGGCATACCTTCATGAGAAATGCAGAGACTGTATTATACATTGTAACGTAAAGCCAGAAAACATTCTACTAGATGCTGGTTTTTGTCCCAAGATTGCAGACTTTGGCCTGGCTAAGCTTGTTGGAAGGGATTTCAGCAGGGTCCTGGCAACAATTAGAGGAACAAAAAACTATCTTTCTCCAGAATGGATTTCTGGGGTGCCTATCACTGCCAAAGCCGACGTGTACAGCTATGGAATGATGCTTTTTGAGCTTGTGTCAGGTAGGAGGAACTCTTATTATGAGTTATCTGATTCTGAAGATGGGAAATTTAGGTTCTTTCCAACCAAGGCAGCAAACATAGTTGCCCAAGGTGGCAATGTTCTTAGCCTTTTGGATCCTTGTTTGGAACAAAATGCTGACGCCGAGGAGGTTACTCGAATGGCAACCGTTGCTTCCTGGTGTATCCAAGATGATGAGACTCACCGGCCAACGATGGGTCAGGTTGTTCATATCCTTGATGGGATCTTGGACGTGAATTTACCTCCAATTCCAACATTTCCTCAAGTGTCTGTTGACTACTAA 2364 0.4408 MTNPRFCLSILVLFFSLYTHPSLAALTTLSADKKLTGDQTLVSEGGVFELGFFKPGNSSNYYIGIWYKKVTQKTIVWVANRDNHVPDKNTATLTISDSNLVLLDGSSNQVWSTNTSSPRSGSVVEAVLLNSGNLVLRDRADDNASEPSWQSFDHPTDTFLPGGKIKLDHKTKKPQYLTSWKNTEDPATGLFSLELDPEGSTSYLITRNKTEQYWTSGAWNGHIFSLVPEMRLNYIFNFSFVSNENESYFTYSLYNSSIISRLLIDVTGQIKQMTWLENAQQWNLFWTQPRKQCDVYAFCGAFGSCSEFSTMGPCNCLKGFEPKSPSDWNLGDYSGGCQRKEKLQCENSNASNRNKDGFLAIPNVVLPKGAQSVGLGNAGECESICLSICSCAAYAYDSNGCSIWVGNLLNVEQLSSDDSSGETLYLKLAASEFHHDDKSSKGTIIGVVVGVVAGIGILLAILWRRKRMVASRKAAKGSLVAYGYRDLQAATRNFSEKLGGGGFGSVFKGTLDDSSVVAVKKLESFGQREKQFQTEVRTIGTIQHVNLVRLHGFCSEGTKRLLVYEYMPNGSLDFHLFQNKNFVVLDWKTRYQIALGIARGLAYLHEKCRDCIIHCNVKPENILLDAGFCPKIADFGLAKLVGRDFSRVLATIRGTKNYLSPEWISGVPITAKADVYSYGMMLFELVSGRRNSYYELSDSEDGKFRFFPTKAANIVAQGGNVLSLLDPCLEQNADAEEVTRMATVASWCIQDDETHRPTMGQVVHILDGILDVNLPPIPTFPQVSVDY 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03018 787 FunFam Serine/threonine-protein kinase 567 774 - -
Viun5g03018 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 220 IPR036426 -
Viun5g03018 787 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Viun5g03018 787 Pfam PAN-like domain 353 411 IPR003609 -
Viun5g03018 787 Gene3D - 23 152 IPR036426 -
Viun5g03018 787 SMART ntp_6 353 428 IPR003609 -
Viun5g03018 787 SMART blect_4 32 155 IPR001480 -
Viun5g03018 787 CDD STKc_IRAK 498 769 - -
Viun5g03018 787 PANTHER OS07G0415500 PROTEIN 7 779 - -
Viun5g03018 787 FunFam Receptor-like protein kinase 4 460 566 - -
Viun5g03018 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 152 - -
Viun5g03018 787 ProSiteProfiles Protein kinase domain profile. 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03018 787 CDD PAN_AP_plant 342 429 - -
Viun5g03018 787 Pfam D-mannose binding lectin 74 181 IPR001480 -
Viun5g03018 787 SUPERFAMILY Protein kinase-like (PK-like) 481 781 IPR011009 -
Viun5g03018 787 ProSitePatterns Protein kinases ATP-binding region signature. 498 521 IPR017441 GO:0005524
Viun5g03018 787 Gene3D Phosphorylase Kinase; domain 1 460 566 - -
Viun5g03018 787 PIRSF SRK 1 786 IPR024171 GO:0004674
Viun5g03018 787 Gene3D Transferase(Phosphotransferase) domain 1 567 774 - -
Viun5g03018 787 CDD B_lectin 35 155 IPR001480 -
Viun5g03018 787 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Viun5g03018 787 ProSiteProfiles PAN/Apple domain profile. 345 429 IPR003609 -
Viun5g03018 787 Pfam Protein kinase domain 495 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03018 787 Coils Coil 785 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03018 Viun-Chr5 41389355 41391978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03018 472 776 Receptor kinase-like Gene Family AT5G20050 43.533 2.89e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun5g03018 Pkinase 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03018 - - gmx:102667456 1190.64