Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02997 ATGGCGGAAGTTAGAACACATAAACTTGTTGAGAAATCTGATGTTGCTCCAGCATCACTTCCTAGTTCTACAACAAGAACAACCTCGTCTCTTCCCCTCTCATTCCTTGACTTACCCTTAGCTGGTCCTGTTTATGTCAAACGCCAATTCTTCTATCAGTTTCCTCACTCCACACACCATTTTTGTGAAACTACACTCCCCACTCTCAAACACTCTCTCTCTCTTATCCTTCAACACTTCTTTCCTCTAGCTGGAAATCTCCTTTGTCCTCCACCACCCCACAAGCCCTTCATTCGCTGCACTGATGATGACACTGTCCCTTTAACCATCGTTGAATCCAACGCTGATTTCAACCATCTCTCATCCCACCACCCTAAGAGTCTCCGAGAATTGGATCACCTGAATCCCGGGTTGACATTCGCAACCATGCATGACGGCACGTTCATTTTCCCACTAGTGGCATTACAAGCCACGGTGTTGCAAAACCATGGCCTTTGCATCGCCATCACGTACTGTCATGTGATGGATGGTAAGTGTTGCAATCATTTCATGAAGTCTTGGTCTTCCCTTTGTCAAAGTGGTGGAGTTGACTTGACGCTTTTGGAGAATTCACCACCGTGCTTCGATAGAAAAGTGTTGAGGGACCCCAGAGGAGGACTCGAGGACATTTTCTTGAGAGACTATTTCGAAGAGAGATCAACTTGGAAGGACAAGCTCATTGATCAAAGTCCTAAACATGGGGAGTACTGTAAGGCGACGATTGTTTTGGGGAGAGATGATATTGAGGGCTTAAAAAGATGGGTTCTGGCACAGTGGAAGAAAAATGAGGAGTTGAACTCCCCGCAATACTTGTCAAAATTTGTGGTTGTTTGTGCTCTTGTGTGGACTAGCTTGGTTAAAACAAGATGCAAAGATGATGATGACGATGAAGATGTAAAAGAAGAGTACTTTCGTTTCGCTGCAGATTGCAGAGGTCTCCTTGGTTATGGTATACCAGAAACATACTTTGGAAACTGCTTAACGCTGTGTTATGCGATGCTAAAGAGAAATGAGCTTAAGGGAGAGGATGGTTTTGTGAATGCGGTGAAGGTGATTGAAAAGACAGTGAGTGATGTAAAAAGTGAGCCTTTTAAAGATGCAGAAGATTGGAGGGCTTTGTCTGTGAAAACGTTTGTGTTGGGAACTCCGTTGCTGGTTACTGGTTCACCTAAGTTCGATGTTTACGAGACTGATTTTGGATTTGGAAGGCCAACCAAAGTTGAAATGGTACATTCCTTGAAGTGCATGTCTCTAGCCGAAAGTAGAGATGAGGAAGGAGGAGTTGAGGTTGGTTTGGTGTGTAAGAGTGCAGAGTTTGAATATTTATTTTATGTCATTGAACAAGGACTACAAACTACAAAAAATCCTCAGTGTGTTAATTACTGA 1425 0.4351 MAEVRTHKLVEKSDVAPASLPSSTTRTTSSLPLSFLDLPLAGPVYVKRQFFYQFPHSTHHFCETTLPTLKHSLSLILQHFFPLAGNLLCPPPPHKPFIRCTDDDTVPLTIVESNADFNHLSSHHPKSLRELDHLNPGLTFATMHDGTFIFPLVALQATVLQNHGLCIAITYCHVMDGKCCNHFMKSWSSLCQSGGVDLTLLENSPPCFDRKVLRDPRGGLEDIFLRDYFEERSTWKDKLIDQSPKHGEYCKATIVLGRDDIEGLKRWVLAQWKKNEELNSPQYLSKFVVVCALVWTSLVKTRCKDDDDDEDVKEEYFRFAADCRGLLGYGIPETYFGNCLTLCYAMLKRNELKGEDGFVNAVKVIEKTVSDVKSEPFKDAEDWRALSVKTFVLGTPLLVTGSPKFDVYETDFGFGRPTKVEMVHSLKCMSLAESRDEEGGVEVGLVCKSAEFEYLFYVIEQGLQTTKNPQCVNY 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02997 474 PANTHER - 8 464 - -
Viun5g02997 474 Gene3D - 248 465 IPR023213 -
Viun5g02997 474 Pfam Transferase family 21 450 - -
Viun5g02997 474 Gene3D - 7 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02997 Viun-Chr5 41196553 41198078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02997 22 417 Monolignol Biosynthesis Gene Families AT5G48930 23.855 5.37e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02997 - - var:108332870 851.662