Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02995 ATGCTACATATGGATAACCAAATTAACCATCACAAGCCAGTGAAGGTATTAGAAGAATGTCAAATTGCTCCACCACCCTCCCTTCCCTCAACCACCCTTCCCCTCACTTTCTTCGACCTTCCATGGTTTTGTTGTCGTGTCCCTATTCAACGCATCTTCTTCTATGAGTTTCCCCATCCTACACACCACTTCCTCCAAACAACACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCAACACTTCTTCCCCTTTGCCTCCAATCTCATTGTTCCACCACAACCCCATCTTTCTCACATTCGTTACCTTCATGGAGATTCTCTCTCCTTCATCGTTGCAGAGTCCACCGCAGACTTCACTCTCCTTGCATCTCATTCTCCCCAAGACGTTCGAAACTGGCACCCTCTTATCCCCACCTTGCCTCCTCCACATGTTCACAAAGATGGCACACGTGTGTTCCCTCTCATGACCATTCAAGTCACGGTTTTCCCAAACTCTGGCTTCACCATCTGTCTCACCTTCAACCATGTTGTCGGCGACGGCAAATCACTTCATCATTTCATCAAGTTTTGGGCTTCTCTTTGCAAAGCAAGAGGGGACTTGGATCCCTCTGAAACCTCCATGTCTCTTCCTTCGCATGAGAGGACAAGAGTTAAAGACCCTAAAGGGCTTAAGCTCTTTTACTCTCAAGCATTTGCGATCATGGAACCCAAAATAACTGAGTTTACTGGGCTCCGGTATCGTTTCACGGTTGTATTGAGCCGTAAACATACTGAAAAACTGAAGAATTGGGTTTCCCTTAAACTCAGTGTCTACGATTCTGGGGCATTACACATATCAACCTTTGTTGTAACATGCTCTTTGATTTGGGTAAGCTTGGTTGGATCAGAGGAGAGCACACAAGACTCTGATAAACTGTGCTTCTTGATATTTGCAGCTGATTCACGTGATTGTCCTGAATTTTCGTTAACTTCAACGTACTTTGGGAATTGTGTGGCTACTTGCATGGTGGCAATGAAGAGGAGTGAGATAGTGGGAGAAAATGGGATCGTTGCTGCGGCAAAGGCTATTGAAAGGGAAATTAGAGATTTCAAGAGTGATGCTTTGAGAAAGTTTGAAAATTTGATTTCAGACTCTAGAGAGTTAGAGAAACTAGGTAAATCTGCGCTGATTATTGCAAGTTCGCCAAAATTTGGTGTGTACCAGTCTGATTTTGGTTGGGGAAAGCCAAAGAAATGTGAAGTAGCGCATGTTGAATCGTCAGCTTTTATGTCTCTTTCTGAATGTAGAGACGAAAAAGAAGGAATTGAGGTTGGATTGGCTCTTGAAAGGACGCAGATGAATAAGTTCAACAACAACTTAGAAAAAGAACTCCATAACATTAATAAATGCTGA 1398 0.4356 MLHMDNQINHHKPVKVLEECQIAPPPSLPSTTLPLTFFDLPWFCCRVPIQRIFFYEFPHPTHHFLQTTLPILKHSLSLSLQHFFPFASNLIVPPQPHLSHIRYLHGDSLSFIVAESTADFTLLASHSPQDVRNWHPLIPTLPPPHVHKDGTRVFPLMTIQVTVFPNSGFTICLTFNHVVGDGKSLHHFIKFWASLCKARGDLDPSETSMSLPSHERTRVKDPKGLKLFYSQAFAIMEPKITEFTGLRYRFTVVLSRKHTEKLKNWVSLKLSVYDSGALHISTFVVTCSLIWVSLVGSEESTQDSDKLCFLIFAADSRDCPEFSLTSTYFGNCVATCMVAMKRSEIVGENGIVAAAKAIEREIRDFKSDALRKFENLISDSRELEKLGKSALIIASSPKFGVYQSDFGWGKPKKCEVAHVESSAFMSLSECRDEKEGIEVGLALERTQMNKFNNNLEKELHNINKC 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02995 465 Gene3D - 14 242 IPR023213 -
Viun5g02995 465 Gene3D - 248 462 IPR023213 -
Viun5g02995 465 Pfam Transferase family 14 457 - -
Viun5g02995 465 PANTHER - 14 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02995 Viun-Chr5 41167048 41168682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02995 14 455 Monolignol Biosynthesis Gene Families AT5G48930 24.017 3.15e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02995 - - gmx:100797294 620.542