Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02994 ATGGATAACCAGATCAACCATCATGAACCAGTGAAAGTGTTAGAAGAATGCCAAGTTGCTCCACCACCCTCCCTTTCCTCAATCACCCTTCCCCTCACTTTCTTCGACATTCCATGGTTAGGTTCTCGCTCTGTTCATCGCATCTTCTTCTTTGAGTTTCCCCATCCCACAAATCATTTTATCCAAACAACACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCAACACTTCTTCCCCTTTGCTTCCAATCTCATCGTTCCACCACAACTCCACCTCTCTCACATCCGTTACCTTCACGGCGACTCTCTCTCCTTCACCGTTGCAGAGTCCACCGCAGACTTCACTCTCCTTGCATCTCATTCTCCCCAAGACGTTCGAAACTGGCACCCTCTTATCCCCACCTTGCCTCCTCCACACGTTGATCAAGATGGCACACGTGTGTTCCCTCTCATGTCCATTCAAGTCACGATTTTTCCAAACTCTGGTTTCGCCATATGTCTCACCTTCAACCACATTGTTAGTGATGGAAAATCACTTCATCATTTCATCAAGTTTTGGGCTTCTCTTTGCAAAGCAAGAGGGGACTTGGATCCCTTTGAAACTTCGTTGTCTCTTCCTTCGTATGAGAGAGATAGACTTGAAGACCCTAACAGGCTTAATCTCCTTTACTCTCAAGTATTTCCAATTAGTGAACAGAAAAGAACCGCGTTCAATGGGTTCCCGTATCGTTTCACTGTCGTATTGAGTCGTGAACAAACAGAGAAACTGAAGAATTGGGTCACTCTTAAATTCGGCATCTACGCTTCTGAGGCATTTCACATATCAACCTTTGTTGTAACATGTTCCTTGATTTGGGTTTGCTTGGTTGGATCAGAGGAGAGCAAACAAGACTGTGATGAACTGCGCTACTTGTTCTTTGTAGCTGATTCACGTGATCGTCCTGAATTTTCGTTAACTTCAACGTACTTTGGGAATTGTCTGACTTCTTGCATGGTGGCATTGAAGAGGAGTGAGATAGTGGGAGAAAACGGAATCGTTGCTGCGGCAAAGGCTATTGAAAGGGAAATTAGAGATTTCAAGAGTGATGCTCTGAGAAAGGCTGAAAAGTTGATGTCAGACTTAAGAGAGTTAGTGAAAATACGTAAATCTGTGTTGGTTATTGCAGGTTCACCAAAATTGGATGTGTACCAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGAAGCAGCACATGTTGAATCGCCGGGATTGATTTCTCTTTCTGACTGTAGAGATGATAAAGGAGGAATTGAGGTTGGATTAGCACTTGACATGACTCAGATGAAGAAGTTCGGCAACATCTTAGAAATGAAACTCCTTAATATTGATAAATTCTGA 1386 0.4351 MDNQINHHEPVKVLEECQVAPPPSLSSITLPLTFFDIPWLGSRSVHRIFFFEFPHPTNHFIQTTLPILKHSLSLSLQHFFPFASNLIVPPQLHLSHIRYLHGDSLSFTVAESTADFTLLASHSPQDVRNWHPLIPTLPPPHVDQDGTRVFPLMSIQVTIFPNSGFAICLTFNHIVSDGKSLHHFIKFWASLCKARGDLDPFETSLSLPSYERDRLEDPNRLNLLYSQVFPISEQKRTAFNGFPYRFTVVLSREQTEKLKNWVTLKFGIYASEAFHISTFVVTCSLIWVCLVGSEESKQDCDELRYLFFVADSRDRPEFSLTSTYFGNCLTSCMVALKRSEIVGENGIVAAAKAIEREIRDFKSDALRKAEKLMSDLRELVKIRKSVLVIAGSPKLDVYQTDFGWGKPKKCEAAHVESPGLISLSDCRDDKGGIEVGLALDMTQMKKFGNILEMKLLNIDKF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02994 461 Gene3D - 6 236 IPR023213 -
Viun5g02994 461 Gene3D - 245 456 IPR023213 -
Viun5g02994 461 PANTHER - 11 455 - -
Viun5g02994 461 Pfam Transferase family 11 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02994 Viun-Chr5 41162396 41164119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02994 67 451 Monolignol Biosynthesis Gene Families AT5G48930 24.878 4.34e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02994 - - gmx:100797294 625.165