Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02993 ATGGATAACCAGATTAACCATCATAAATCAGTGAAGGTGATAGAAGAATGCCAAGTTGCTCCACCACCCTCCCTTCCCTCAACCACCCTTCCCCTCACTTTCTTCGACCTTCCATGGTTTTGTTGTCGTGTCCCTATTCAACGCATCTTCTTCTATGAGTTTCCCCATCCTACACACCACTTCCTCCAAACAACACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCAACACTTCTTCCCCTTTGCCTCCAATCTCATTGTTCCACCACAACCCCATCTTTCTCACATTCGTTACCTTCATGGAGATTATCTCTCCTTCATCGTTGCAGAGTCCACTGCAGACTTCACTCTCCTTGCATCTCATTCTCCCCAAGATGTTCGAAACTGGCACCCTCTTATCCCCACATTGCCTCCTCCACATGTTAACAAAGATGGCACACGTGTGTTCCCTCTCATGACCATTCAAGTCACGGTTTTCCCAAACTCTGGCTTCACCATCTGTCTCACCTTCAACCATGTTGTCGGCGACGGCAAATCACTTCATCATTTCATCAAGTTTTGGGCCTCTCTTTGCAAAGCAAGAGGGGACTTGGATCCCTTTGAAACCACACTGTCTCTTCCTTCGCATGAGAGGACAAGACTTAAAGACCCTAAAGGGCTTAAGCTCCTTTACTCTCAAGCAATTGAAATCACGGAACCCAAAATAACCGAGTTTGTTGGGCTCCGGTTTCGTTTCAGTGTAGTATTGAGTCGTGAACTTATTGACAAATTGAAGAATTGGGTCTCTTTTAAATGCGGCACTCACGATTCCGGGGCACTACATATATCAACCTTTGTCATAACATGCTCCTTGATTTGGGTTTGCATGGTTGGATCCGAGGAGAGCGAACAATATTCTGATCAACTATGCTACTTGGTGTTTCCAGCAGATTCTCGTGATCGTCCTGAATTTTCGTTAACTTCAACGTACTTTGGGAATTGTCTGACTATTTGCATGGCGGCAATGAAGAGGAGTGAGATAGTGGGAGAAAATGGGATCGTTGCTGCTGCGAATGCTATTGAAAGGGAAATTAGAGATTTCAAGAGTGATGCTTTGAAAAAGGTTGAAAATTGGGTATCAGATTATCGAGAAAGAGTTAAACCAGGTAAATCTAGGTTGTTTATTGCAGGTTCACCAAAATTAGGTGTGTACCAGACTGATTTTGGTTGGGGAAAGCCTAAGAAGTGTGAAGCAGCGCATATTGAATCTTCAGCATCTATTTCTCTTTGTGATTGCAGAGACGAAAAAGAAGGAATTCAAGTTGGATTGGCACTTGAAAGGGTTCAGATGAATAAGTTCGTCAACATCTTAGAACAGAAACTCCATAATATTGATAAATTCTGA 1389 0.4341 MDNQINHHKSVKVIEECQVAPPPSLPSTTLPLTFFDLPWFCCRVPIQRIFFYEFPHPTHHFLQTTLPILKHSLSLSLQHFFPFASNLIVPPQPHLSHIRYLHGDYLSFIVAESTADFTLLASHSPQDVRNWHPLIPTLPPPHVNKDGTRVFPLMTIQVTVFPNSGFTICLTFNHVVGDGKSLHHFIKFWASLCKARGDLDPFETTLSLPSHERTRLKDPKGLKLLYSQAIEITEPKITEFVGLRFRFSVVLSRELIDKLKNWVSFKCGTHDSGALHISTFVITCSLIWVCMVGSEESEQYSDQLCYLVFPADSRDRPEFSLTSTYFGNCLTICMAAMKRSEIVGENGIVAAANAIEREIRDFKSDALKKVENWVSDYRERVKPGKSRLFIAGSPKLGVYQTDFGWGKPKKCEAAHIESSASISLCDCRDEKEGIQVGLALERVQMNKFVNILEQKLHNIDKF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02993 462 Gene3D - 10 238 IPR023213 -
Viun5g02993 462 Gene3D - 245 459 IPR023213 -
Viun5g02993 462 Pfam Transferase family 10 451 - -
Viun5g02993 462 PANTHER - 10 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02993 Viun-Chr5 41155420 41156808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02993 11 452 Monolignol Biosynthesis Gene Families AT5G48930 24.301 6.93e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02993 - - gmx:100797294 635.95