Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02991 ATGGCTCACCGGAGAGAACTTGATTCAGTGAAGATCATAGAGCAGTGTCAAGTTTCTCCGCCACCAAATTCTGTTCCTTCAACCACTCTTCCCCTCACTTTCTTTGACATTCCATGGTTCTTCTGCAACTCCATCCAACGCATCTTCTTCTACGAGTTTCCCCACCCCACTCACCACTTCCTCCAAGAAGCACTTCCCATTCTCAAACACTCTCTTTCGCTCTCTCTCCAACATTTCTTCCCTTTTGCCTCCAATCTCATCGTTCCACCACAACTCCACCTCTCTCACATTCGTTACCTTCACGGCGACTCTCTCTCCTTCACCGTTGCAGAGTCCACAGCAGACTTCAATCTCCTCACGTCAGATTCTCCTCAAGACGTTCAAAACTGGCACCCTCTTGTTCCTACCTTGCCTTCCGCACGTGTTGAGCAGGATGGCATACGTGTGATGCCTCTCATGGCCATTCAGGTCACGCTTTTCCCAAACTCTGGCTTCAGCATATGTCTCACCTTCAACCACCTTGCTGGGGATGGCAAATCACTTCATCATTTCATCAAGTTTTGGGCTTCTCTTTGCAATGCGAGAGGGGAGTTCACTTCCATTGAGGCCTCTTTGTCTCTTCCTTCACACGAGAGAGACAAAGTTAAAGACCCAAAAGGGCTTAAGTTCATTTACTTTCAAGAACTTGAACATTTTGAGTCCAAAAGCATGGAGTTCGCTGGGCTCGTGCGAGATGTTTCCACTAACAAGCTGCGCTTCACTCTTGTACTCAGTCTTGAACAAGTTGAGAAACTAAAGAAATGGGTCTCTCTTAAATGTGCAAGCAACGATTCGGGGTTATTACACATATCAACCTTTGTTGTAGCATGCTCTATAATTTGGGTTTGCATGATTAGGTCGGAAGAAAAAAGAGCCATTTGTTTTTCAGAAGAGTGTGATGAACTTTGTCACTTGGTGTTTCTAGCAGATTGTCGCGATCGTCCTGAATTTTCATTACCTTCCACGTACTTTGGAAATTGTTTAACCGCTTACATTGTGGCAATAAAGAGGAATGAGCTGGTGGGAGAAGATGGGATCGTTGCTGCGGCAAATGCTATTGGAAAGGAAATTAGATATTTGAAGAGTGATCCTTTGAGAAATGCTGAAACGTTGATGTCAGATTATAGAGAGTTAGGAAAACCAGGTAAATCTGTGTTGGTTATTGCAGGTTCACCAAAATTGGGTGTATACCAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGAAGCAGCGCATATTGAATCGTCAGGATCCATTTCTCTTTCTGATTGCAGAGACGAAAAAGGAGGAATTGAGGTAGAACACTTCAGAAAATAG 1359 0.443 MAHRRELDSVKIIEQCQVSPPPNSVPSTTLPLTFFDIPWFFCNSIQRIFFYEFPHPTHHFLQEALPILKHSLSLSLQHFFPFASNLIVPPQLHLSHIRYLHGDSLSFTVAESTADFNLLTSDSPQDVQNWHPLVPTLPSARVEQDGIRVMPLMAIQVTLFPNSGFSICLTFNHLAGDGKSLHHFIKFWASLCNARGEFTSIEASLSLPSHERDKVKDPKGLKFIYFQELEHFESKSMEFAGLVRDVSTNKLRFTLVLSLEQVEKLKKWVSLKCASNDSGLLHISTFVVACSIIWVCMIRSEEKRAICFSEECDELCHLVFLADCRDRPEFSLPSTYFGNCLTAYIVAIKRNELVGEDGIVAAANAIGKEIRYLKSDPLRNAETLMSDYRELGKPGKSVLVIAGSPKLGVYQTDFGWGKPKKCEAAHIESSGSISLSDCRDEKGGIEVEHFRK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02991 452 PANTHER - 9 448 - -
Viun5g02991 452 Pfam Transferase family 10 448 - -
Viun5g02991 452 Gene3D - 9 241 IPR023213 -
Viun5g02991 452 Gene3D - 247 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02991 Viun-Chr5 41143735 41145500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02991 13 419 Monolignol Biosynthesis Gene Families AT5G48930 26.047 2.04e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02991 - - vra:106771201 768.844